RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 MCM8Q9UJA3 840 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 PSME2Q9UL46 239 aa18.74■□□□□ 0.59
CLK3-225ENST00000569063 A0A0G2JMM0 328 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 A0A1W2PPB8 328 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 A0A1W2PRS3 328 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 KIR3DP1A8MWS1 328 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 GLSO94925 669 aaPredicted RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 P04436 131 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 ATP1B1P05026 303 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 NUDT17P0C025 328 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 FBXO45P0C2W1 286 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 CCL3P10147 92 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 CPA3P15088 417 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 CSNK2A2P19784 350 aaPredicted RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 COL8A1P27658 744 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 HTR6P50406 440 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 NAGLUP54802 743 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 RAE1P78406 368 aaKnown RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 SPIN4Q56A73 249 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 FRMD7Q6ZUT3 714 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 MMP21Q8N119 569 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 ZNF615Q8N8J6 731 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 ZNF441Q8N8Z8 693 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 OR7G1Q8NGA0 311 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 OR52N2Q8NGI0 321 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 PAQR8Q8TEZ7 354 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 C11orf24Q96F05 449 aaPredicted RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 KCNA7Q96RP8 456 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 TTTY12Q9BZ98 90 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 OR10A5Q9H207 317 aa18.73■□□□□ 0.59
CLK3-225ENST00000569063 SPTBN1Q01082 2364 aaKnown RBP18.73■□□□□ 0.59
CLK3-225ENST00000569063 C2orf92A0A1B0GVN3 265 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 ACOT7O00154 380 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 ESRRAP11474 423 aaPredicted RBP18.72■□□□□ 0.59
CLK3-225ENST00000569063 S1PR1P21453 382 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 NT5EP21589 574 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 SERPINB3P29508 390 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 FOXA1P55317 472 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 PPIAP62937 165 aaKnown RBP18.72■□□□□ 0.59
CLK3-225ENST00000569063 HMGCS1Q01581 520 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 PLGLB1Q02325 96 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 MAP4K2Q12851 820 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 SLC22A10Q63ZE4 541 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 GALNT18Q6P9A2 607 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 RPTNQ6XPR3 784 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 FAM47EQ6ZV65 393 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 DOLPP1Q86YN1 238 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 RIBC1Q8N443 379 aaPredicted RBP18.72■□□□□ 0.59
CLK3-225ENST00000569063 APIPQ96GX9 242 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 C12orf65Q9H3J6 166 aaKnown RBP18.72■□□□□ 0.59
CLK3-225ENST00000569063 ZDHHC11Q9H8X9 412 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 SIRT5Q9NXA8 310 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 MEMO1Q9Y316 297 aa18.72■□□□□ 0.59
CLK3-225ENST00000569063 A0A1B0GTH9 108 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 G3V3Y1 287 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 PRRG2O14669 202 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNHIT1O43257 154 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 PCDH7O60245 1069 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNF500O60304 480 aaPredicted RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 CDC40O60508 579 aaKnown RBP eCLIP18.71■□□□□ 0.59
CLK3-225ENST00000569063 ERAL1O75616 437 aaKnown RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 DRD2P14416 443 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 FEN1P39748 380 aaKnown RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 ACSM2AQ08AH3 577 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 MGAT2Q10469 447 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 FOXO1Q12778 655 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ART3Q13508 389 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 HYAL4Q2M3T9 481 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 PRICKLE4Q2TBC4 344 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 CFAP157Q5JU67 520 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 C6orf163Q5TEZ5 329 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ACSM2BQ68CK6 577 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 WDR93Q6P2C0 686 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 MRGPRGQ86SM5 289 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 SLC22A16Q86VW1 577 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 TAGAPQ8N103 731 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 C4orf33Q8N1A6 199 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 VWA5B2Q8N398 1253 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNF808Q8N4W9 903 aaPredicted RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 C17orf47Q8NEP4 570 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 OR2W6PQ8NHA6 318 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 AENQ8WTP8 325 aaKnown RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 ADIPOR1Q96A54 375 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 KLHL29Q96CT2 875 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 CNRIP1Q96F85 164 aaPredicted RBP18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNF681Q96N22 645 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 IL1RL2Q9HB29 575 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 MKS1Q9NXB0 559 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 CNIH4Q9P003 139 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 HEY2Q9UBP5 337 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNF639Q9UID6 485 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 ZNF780BQ9Y6R6 833 aa18.71■□□□□ 0.59
CLK3-225ENST00000569063 GNG14A0A1W2PPG7 69 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 TLDC2A0PJX2 215 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 SLU7O95391 586 aaKnown RBP18.7■□□□□ 0.58
CLK3-225ENST00000569063 AGAP20933 346 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 TIA1P31483 386 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLK3-225ENST00000569063 PTGS2P35354 604 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 DCTP40126 519 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms