RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RNF111Q6ZNA4 994 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 SLC29A4Q7RTT9 530 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 OR5L2Q8NGL0 311 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ZNF675Q8TD23 568 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ACTRT2Q8TDY3 377 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 STON2Q8WXE9 905 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 GFM2Q969S9 779 aaKnown RBP11.34□□□□□ -0.59
SF3B3-208ENST00000567250 PPWD1Q96BP3 646 aaKnown RBP11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ERP27Q96DN0 273 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ZBED6CLQ96FA7 236 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-208ENST00000567250 EGLN2Q96KS0 407 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ZNF681Q96N22 645 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 CCDC134Q9H6E4 229 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-208ENST00000567250 TCF7L2Q9NQB0 619 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 SH3BP4Q9P0V3 963 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 ERVK-19Q9WJR5 959 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 CFL2Q9Y281 166 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 TP53TG5Q9Y2B4 290 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 PIEZO2Q9H5I5 2752 aa11.34□□□□□ -0.59
SF3B3-208ENST00000567250 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 WASHC1A8K0Z3 465 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 MYO1GB0I1T2 1018 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 BCAS2O75934 225 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 DDAH2O95865 285 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 IFI6P09912 130 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 SOX11P35716 441 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 GPR143P51810 404 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 AQP5P55064 265 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 CLDN8P56748 225 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 STX1BP61266 288 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 LY6DQ14210 128 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF267Q14586 743 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 RPS6KA2Q15349 733 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 PRICKLE4Q2TBC4 344 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 SLC9B1Q4ZJI4 515 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 H3F3CQ6NXT2 135 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 ASB18Q6ZVZ8 466 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 MAVSQ7Z434 540 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 OR7G1Q8NGA0 311 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF721Q8TF20 911 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 UCN3Q969E3 161 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 SENP5Q96HI0 755 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 LMF1Q96S06 567 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 DPY30Q9C005 99 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 RNF32Q9H0A6 362 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 WDR55Q9H6Y2 383 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-208ENST00000567250 AIG1Q9NVV5 245 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 MAT2BQ9NZL9 334 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 BAIAP2L1Q9UHR4 511 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 ATP6V1HQ9UI12 483 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 BOD1L1Q8NFC6 3051 aa11.33□□□□□ -0.6
SF3B3-208ENST00000567250 A0A1W2PS29 197 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 A8MUI8 341 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 ZNF195O14628 629 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 UBDO15205 165 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 COQ9O75208 318 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 IGKV3-11P04433 115 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 VIMP08670 466 aaKnown RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 GPC1P35052 558 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 DIO3P55073 304 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 ARG2P78540 354 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 FUT7Q11130 342 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 MAP4K2Q12851 820 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 GSTA3Q16772 222 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 ACER2Q5QJU3 275 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 FAM180BQ6P0A1 224 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 IGFL2Q6UWQ7 119 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 IGFL3Q6UXB1 125 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 CAMKMTQ7Z624 323 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 KIF2BQ8N4N8 673 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 OR9A2Q8NGT5 310 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 NUBPLQ8TB37 319 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 PSMF1Q92530 271 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 TESCQ96BS2 214 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 CCDC28BQ9BUN5 200 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 BHLHE41Q9C0J9 482 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 NEUROD4Q9HD90 331 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
SF3B3-208ENST00000567250 ACSS1Q9NUB1 689 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 EXO1Q9UQ84 846 aaKnown RBP11.32□□□□□ -0.6
SF3B3-208ENST00000567250 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 MANFP55145 182 aaKnown RBP11.31□□□□□ -0.6
SF3B3-208ENST00000567250 SLC37A1P57057 533 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 RNF4P78317 190 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 PSPHP78330 225 aa11.31□□□□□ -0.6
SF3B3-208ENST00000567250 SRSF11Q05519 484 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms