RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 AMER2Q8N7J2 671 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 OR7G1Q8NGA0 311 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 CEP70Q8NHQ1 597 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 SUN3Q8TAQ9 357 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 NUBPLQ8TB37 319 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 HAS2Q92819 552 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 NCLNQ969V3 563 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 PPWD1Q96BP3 646 aaKnown RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 BBC3Q96PG8 261 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 TSSK3Q96PN8 268 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 NPAS2Q99743 824 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 SIKE1Q9BRV8 207 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 WDR55Q9H6Y2 383 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 TRIM45Q9H8W5 580 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 KCNK13Q9HB14 408 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 ACSS1Q9NUB1 689 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 GIMAP4Q9NUV9 329 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 MAT2BQ9NZL9 334 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 MARCOQ9UEW3 520 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 TEKT2Q9UIF3 430 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 TP53TG5Q9Y2B4 290 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 USH1CQ9Y6N9 552 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 FREM3P0C091 2139 aa8.96□□□□□ -0.98
RABGGTA-221ENST00000561055 A0A087WV62 115 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 TRBV11-1A0A0K0K1C0 115 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PLOD2O00469 737 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SCAMP2O15127 329 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PLOD3O60568 738 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 DPM1O60762 260 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 BCAS2O75934 225 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZFAND5O76080 213 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ALDOCP09972 364 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 G6PDP11413 515 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 EPHA3P29320 983 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 FEN1P39748 380 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 MDH1P40925 334 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 MRPL19P49406 292 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 DIO3P55073 304 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 MLF1P58340 268 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 RNF4P78317 190 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 IRX1P78414 480 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF267Q14586 743 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PTGR1Q14914 329 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 MPEG1Q2M385 716 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF750Q32MQ0 723 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SLC9B1Q4ZJI4 515 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SOWAHCQ53LP3 525 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF385BQ569K4 471 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF628Q5EBL2 1059 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ACER2Q5QJU3 275 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 HSDL2Q6YN16 418 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ASB18Q6ZVZ8 466 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 RPS19BP1Q86WX3 136 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 GALNT12Q8IXK2 581 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 CCDC116Q8IYX3 515 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 KIF2BQ8N4N8 673 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SIRT6Q8N6T7 355 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF321PQ8N8H1 164 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF615Q8N8J6 731 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 OR5L2Q8NGL0 311 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SLC39A7Q92504 469 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 TM9SF4Q92544 642 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 EXOSC8Q96B26 276 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 TESCQ96BS2 214 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PPP1R36Q96LQ0 422 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 CCDC28BQ9BUN5 200 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 C1orf50Q9BV19 199 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 DEFB126Q9BYW3 111 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 BRINP2Q9C0B6 783 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 OR8D2Q9GZM6 311 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ZBTB20Q9HC78 741 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 AIG1Q9NVV5 245 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 STMN3Q9NZ72 180 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 NTMQ9P121 344 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 PTGFRNQ9P2B2 879 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 MYOTQ9UBF9 498 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 COPS7AQ9UBW8 275 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ERVK-19Q9WJR5 959 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 ENTPD4Q9Y227 616 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 GPR45Q9Y5Y3 372 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 SHANK1Q9Y566 2161 aa8.95□□□□□ -0.98
RABGGTA-221ENST00000561055 GOLGA8QA0A0J9YX86 632 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 GOLGA8OA6NCC3 632 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 TCP11X1B4DZS4 312 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 GOLGA8NF8WBI6 632 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 HRKO00198 91 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 PRKNO60260 465 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 NT5EP21589 574 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 TRHRP34981 398 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 HPCAL1P37235 193 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 SRSF11Q05519 484 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 GTF3C1Q12789 2109 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 RAPSNQ13702 412 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 GSTA3Q16772 222 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 DPY19L1Q2PZI1 675 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 LSM12Q3MHD2 195 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 FHL5Q5TD97 284 aa8.94□□□□□ -0.98
RABGGTA-221ENST00000561055 C6orf163Q5TEZ5 329 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms