RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PLPPR4Q7Z2D5 763 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PIGWQ7Z7B1 504 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SHDQ96IW2 340 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PGLYRP2Q96PD5 576 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GAL3ST1Q99999 423 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 BCAS3Q9H6U6 928 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PRSS51A0A1B0GVH4 220 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FUOMA2VDF0 154 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TGM5O43548 720 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ITGB5P18084 799 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PMPCAQ10713 525 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PIGZQ86VD9 579 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 IL17RCQ8NAC3 791 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 OR4Q3Q8NH05 313 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PTERQ96BW5 349 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 BARD1Q99728 777 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 E9PCH4 1651 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CCDC85CA6NKD9 419 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SLC22A5O76082 557 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ALDOAP04075 364 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 AKAIN1P0CW23 69 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 RPL7P18124 248 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 MSX2P35548 267 aaPredicted RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF266Q14584 549 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 MPPED2Q15777 294 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FAM182AQ5T1J6 154 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SSX7Q7RTT5 188 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TRAPPC6BQ86SZ2 158 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PCED1AQ9H1Q7 454 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TSPAN11A1L157 253 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 BLOC1S5-TXNDC5H3BN57 136 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 C6orf141Q5SZD1 244 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TSSK4Q6SA08 328 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 MR1Q95460 341 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 KIAA1143Q96AT1 154 aaPredicted RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 WDR55Q9H6Y2 383 aaPredicted RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CDK5RAP2Q96SN8 1893 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GLUD2P49448 558 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 RPS3AP61247 264 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FGFBP1Q14512 234 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 GPR68Q15743 365 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FKBP1CQ5VVH2 108 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CNKSR3Q6P9H4 555 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 KCNRGQ8N5I3 272 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ACBD7Q8N6N7 88 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SYT14Q8NB59 555 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PLPP5Q8NEB5 264 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SERTAD4Q9NUC0 356 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 IL20RAQ9UHF4 553 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SPATA31D3P0C874 917 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CELP19835 753 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 IL4RP24394 825 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TGFBIQ15582 683 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PROX2Q3B8N5 592 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SPATA31D4Q6ZUB0 917 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 GPR88Q9GZN0 384 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PRSS3P35030 304 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 DLX5P56178 289 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 RAB11AP62491 216 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ITPRIPL2Q3MIP1 535 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PHYHD1Q5SRE7 291 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ADGRF1Q5T601 910 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BANPQ8N9N5 519 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 DCUN1D4Q92564 292 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TSSK6Q9BXA6 273 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 POLDIP3Q9BY77 421 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 LYRM2Q9NU23 88 aaPredicted RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CHRNA1P02708 482 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CDH15P55291 814 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PRPS1P60891 318 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SP3Q02447 781 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF74Q16587 644 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 KIF26BQ2KJY2 2108 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 KBTBD6Q86V97 674 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 NLRP8Q86W28 1048 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 GCNT2Q8N0V5 402 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FBXO15Q8NCQ5 510 aaPredicted RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 NPIPA5A0A0B4J1W7 369 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A6P0DMU7 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A5P0DMU8 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A7P0DMV0 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A8P0DMV1 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A9P0DMV2 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 RBMS1P29558 406 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SLC17A1Q14916 467 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PPA1Q15181 289 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A2Q5DJT8 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A1Q5HYN5 189 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms