RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF347Q96SE7 839 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 SORBS1Q9BX66 1292 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 WDR12Q9GZL7 423 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 AIG1Q9NVV5 245 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 DLGAP4Q9Y2H0 992 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 NAALAD2Q9Y3Q0 740 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 GPC6Q9Y625 555 aaPredicted RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 A0A0G2JN53 185 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 A0A1B0GX78 115 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 AGRPO00253 132 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ANXA4P09525 319 aaPredicted RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 IL1RNP18510 177 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 SDC1P18827 310 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ITIH1P19827 911 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 AVPR1BP47901 424 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 BMXP51813 675 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 SLC7A2P52569 658 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 DIO3P55073 304 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PUM1Q14671 1186 aaKnown RBP eCLIP11.6□□□□□ -0.553e-10■□□□□ 8.1
SCARB1-204ENST00000535005 ANKDD1AQ495B1 522 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PRAMEF17Q5VTA0 474 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 NANOGP8Q6NSW7 305 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 TTLL10Q6ZVT0 673 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PRSS41Q7RTY9 318 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 FAM9CQ8IZT9 166 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PROKR1Q8TCW9 393 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 CANT1Q8WVQ1 401 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 S100ZQ8WXG8 99 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 RDH12Q96NR8 316 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 CGREF1Q99674 301 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 CTRCQ99895 268 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 MROQ9BYG7 248 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 BRINP2Q9C0B6 783 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 LYRM4Q9HD34 91 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 LYARQ9NX58 379 aaKnown RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PISDQ9UG56 409 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 ZNF639Q9UID6 485 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 PSME2Q9UL46 239 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 POLR3HQ9Y535 204 aaPredicted RBP11.6□□□□□ -0.55
SCARB1-204ENST00000535005 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
SCARB1-204ENST00000535005 KIF26BQ2KJY2 2108 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SPEGQ15772 3267 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
SCARB1-204ENST00000535005 RNF103-CHMP3A0A140T963 221 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 A0A1W2PPW3 197 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
SCARB1-204ENST00000535005 B3GALT2O43825 422 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 TMPRSS11DO60235 418 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 B3GALT4O96024 378 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 ATP6V1B2P21281 511 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 S100A1P23297 94 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 CERS1P27544 350 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SLAMF1Q13291 335 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 RUNX2Q13950 521 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 RBM48Q5RL73 367 aaKnown RBP11.59□□□□□ -0.55
SCARB1-204ENST00000535005 BROXQ5VW32 411 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 TMEM53Q6P2H8 277 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 IGF2-ASQ6U949 168 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 CYP20A1Q6UW02 462 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 EPHX4Q8IUS5 362 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SLC38A9Q8NBW4 561 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 OR9A4Q8NGU2 314 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 TM4SF18Q96CE8 201 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SPRY4Q9C004 299 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 TMEM45AQ9NWC5 275 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 KCMF1Q9P0J7 381 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 DHCR7Q9UBM7 475 aaKnown RBP11.59□□□□□ -0.55
SCARB1-204ENST00000535005 SATB2Q9UPW6 733 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 ASB4Q9Y574 426 aa11.59□□□□□ -0.55
SCARB1-204ENST00000535005 HEMK1Q9Y5R4 338 aaPredicted RBP11.59□□□□□ -0.55
SCARB1-204ENST00000535005 GNG14A0A1W2PPG7 69 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PMS2P1A4D2B8 440 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 FAM149AA5PLN7 773 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SAC3D1A6NKF1 404 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SGK494L7N484 410 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 CPNE3O75131 537 aaKnown RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 GUCY1B2O75343 617 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 GBAP04062 536 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 G6PDP11413 515 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 TACR1P25103 407 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 RORAP35398 523 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ASMTP46597 345 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MAPK12P53778 367 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MAPK10P53779 464 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 C21orf58P58505 322 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 GABARAPL2P60520 117 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 OXA1LQ15070 435 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 NDUFA5Q16718 116 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 C3orf38Q5JPI3 329 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 FGD3Q5JSP0 725 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 TMEM164Q5U3C3 297 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 IKBIPQ70UQ0 350 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MED25Q71SY5 747 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ADGRG5Q8IZF4 528 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms