RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DCST1Q5T197 706 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ALKAL2Q6UX46 152 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 CD300LGQ6UXG3 332 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 FAM92BQ6ZTR7 304 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 CACUL1Q86Y37 369 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 OR52I1Q8NGK6 324 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 OR2T35Q8NGX2 323 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 HUS1BQ8NHY5 278 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 C9orf43Q8TAL5 461 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 GANCQ8TET4 914 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TADA1Q96BN2 335 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 WDR89Q96FK6 387 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SMG9Q9H0W8 520 aaKnown RBP7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ABCG4Q9H172 646 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 ERVMER34-1Q9H9K5 563 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 SEMA3GQ9NS98 782 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 PTGFRNQ9P2B2 879 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 TRPC4Q9UBN4 977 aa7.24□□□□□ -1.25
NEDD9-208ENST00000504387 MTMR11A4FU01 709 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 WASH4PA8MWX3 477 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CHP2O43745 196 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MPC2O95563 127 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MT-ND4P03905 459 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DNASE1P24855 282 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 BDKRB1P46663 353 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TAS2R50P59544 299 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 BNC1Q01954 994 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PRKCZQ05513 592 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DSC1Q08554 894 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CRHR2Q13324 411 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PUM1Q14671 1186 aaKnown RBP eCLIP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 HECTD3Q5T447 861 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 GPRC6AQ5T6X5 926 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RAET1GQ6H3X3 334 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 KIAA0907Q7Z7F0 614 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 LUZP2Q86TE4 346 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SERINC5Q86VE9 423 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 KLBQ86Z14 1044 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 FTMTQ8N4E7 242 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 NANOGP1Q8N7R0 232 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ARL14EPQ8N8R7 260 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF740Q8NDX6 193 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DBF4BQ8NFT6 615 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 OR52E4Q8NGH9 312 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 WDR48Q8TAF3 677 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 WFDC5Q8TCV5 224 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ASZ1Q8WWH4 475 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 XAGE5Q8WWM1 108 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 DNAJC11Q9NVH1 559 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CNIH4Q9P003 139 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 GSTK1Q9Y2Q3 226 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SLC38A8A6NNN8 435 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZAR1LA6NP61 321 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PITPNM1O00562 1244 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MRPS14O60783 128 aaKnown RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SERPIND1P05546 499 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MAPKAPK2P49137 400 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TNK1Q13470 666 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 NTRK2Q16620 822 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TUSC1Q2TAM9 212 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 KLHL12Q53G59 568 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TXNDC8Q6A555 127 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM81Q6P7N7 255 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SMARCD3Q6STE5 483 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF730Q6ZMV8 503 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 IQCHQ86VS3 1027 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 OR4C15Q8NGM1 316 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 KLK6Q92876 244 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RNFT2Q96EX2 444 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 MYO19Q96H55 970 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SCLYQ96I15 445 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZDHHC6Q9H6R6 413 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 HCN3Q9P1Z3 774 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 KLHL21Q9UJP4 597 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 PADI2Q9Y2J8 665 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TEX13CA0A0J9YWL9 993 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TRIM77I1YAP6 450 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 M0QZQ0 153 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SCAMP2O15127 329 aaKnown RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 COCHO43405 550 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SEMA7AO75326 666 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 EPHX1P07099 455 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF30P17039 623 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 HLA-DMAP28067 261 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 ETV3P41162 512 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CSKP41240 450 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 STK19P49842 368 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 LIMK1P53667 647 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RPS7P62081 194 aaKnown RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RHAGQ02094 409 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 CNTN1Q12860 1018 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TCEA2Q15560 299 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 LGALSLQ3ZCW2 172 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-208ENST00000504387 FAAP20Q6NZ36 180 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 TMEM91Q6ZNR0 172 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 SLC24A5Q71RS6 500 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 GPR155Q7Z3F1 870 aa7.23□□□□□ -1.25
NEDD9-208ENST00000504387 RTN4RL1Q86UN2 441 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms