RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 HPNP05981 417 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 ALOX15P16050 662 aaPredicted RBP13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 CD22P20273 847 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 HERVK_113P63132 956 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 ERVK-8P63133 956 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 IRF8Q02556 426 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 TOMM20Q15388 145 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 FBXO48Q5FWF7 155 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 DGAT2L6Q6ZPD8 337 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 P3H2Q8IVL5 708 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 MBD3L2Q8NHZ7 208 aaPredicted RBP13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 TANKQ92844 425 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 UBE2E3Q969T4 207 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 ESAMQ96AP7 390 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 ERVK-6Q9BXR3 956 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 DERL2Q9GZP9 239 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 WWTR1Q9GZV5 400 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 POPDC3Q9HBV1 291 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 IKBKGQ9Y6K9 419 aa13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 FN1P02751 2386 aaKnown RBP13.13□□□□□ -0.31
UPF3AP2-201ENST00000457924 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 SH3BGRLO75368 114 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 ERN1O75460 977 aaKnown RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 TGFB1P01137 390 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 PCNAP12004 261 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 MASP1P48740 699 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 CDK9P50750 372 aaKnown RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 SLC12A2P55011 1212 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 MGAT5Q09328 741 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 CHIT1Q13231 466 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 SLAMF1Q13291 335 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 RCAN2Q14206 197 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZNF267Q14586 743 aaPredicted RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 EBPQ15125 230 aaKnown RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 RPS6KA2Q15349 733 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 TBCCQ15814 346 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 LCE2AQ5TA79 106 aaPredicted RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 STEAP4Q687X5 459 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 GPR180Q86V85 440 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 GPSM1Q86YR5 675 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 ST13P4Q8IZP2 240 aaPredicted RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 RILPQ96NA2 401 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 MDFIQ99750 246 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 UBQLN3Q9H347 655 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 JRKLQ9Y4A0 524 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
UPF3AP2-201ENST00000457924 C2orf92A0A1B0GVN3 265 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CASKO14936 926 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 OR10H2O60403 315 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CCNT2O60583 730 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 TMIGD3P0DMS9 266 aaPredicted RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 BMP7P18075 431 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SERPINB1P30740 379 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CPA2P48052 419 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SLC37A1P57057 533 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 FBXW4P57775 412 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 RPP38P78345 283 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 TNFRSF17Q02223 184 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 Q5PR19 223 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 LCE2CQ5TA81 110 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 MED27Q6P2C8 311 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 VWA5B2Q8N398 1253 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SPATA6LQ8N4H0 392 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 SMPDL3BQ92485 455 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 RIT1Q92963 219 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 ISL2Q96A47 359 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 LRRC39Q96DD0 335 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CMTM7Q96FZ5 175 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 GNRHR2Q96P88 292 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 CD274Q9NZQ7 290 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 EIF3LQ9Y262 564 aaKnown RBP13.11□□□□□ -0.31
UPF3AP2-201ENST00000457924 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms