RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 EFCAB9A8MZ26 197 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 FXYD1O00168 92 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF12P17014 697 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 TNFRSF1BP20333 461 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 GUCA1AP43080 201 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZDHHC1Q8WTX9 485 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 S100ZQ8WXG8 99 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 FGF22Q9HCT0 170 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ACTR10Q9NZ32 417 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 PCDHA9Q9Y5H5 950 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 RNASET2O00584 256 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 REM1O75628 298 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 SOX14O95416 240 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 DDCP20711 480 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 CERS1P27544 350 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 CXCL12P48061 93 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ADPRHP54922 357 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 NFATC3Q12968 1075 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF267Q14586 743 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 ACOT4Q8N9L9 421 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 SPATA9Q9BWV2 254 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 PHF7Q9BWX1 381 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 YTHDF1Q9BYJ9 559 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 GSTK1Q9Y2Q3 226 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 PLEKHM1Q9Y4G2 1056 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 POM121BA6NF01 834 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 EMC8O43402 210 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 UBXN7O94888 489 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 CISD3P0C7P0 127 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 PTGER1P34995 402 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 TALDO1P37837 337 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 HBA1P69905 142 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 CLEC12AQ5QGZ9 265 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 SMARCD3Q6STE5 483 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 FGD2Q7Z6J4 655 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 MFSD2AQ8NA29 543 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM19Q96HH6 336 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 RDH12Q96NR8 316 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 LGR4Q9BXB1 951 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 SERHL2Q9H4I8 314 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 MYNNQ9NPC7 610 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 SERHLQ9NQF3 203 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 COPS7AQ9UBW8 275 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 PPIL1Q9Y3C6 166 aa10.99□□□□□ -0.65
TRAPPC9-202ENST00000438773 RP1P56715 2156 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 FOXE1O00358 373 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 MPZL2O60487 215 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 MOSPD3O75425 235 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 PVRP15151 417 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 BCAP31P51572 246 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 TAS2R38P59533 333 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 FCHO2Q0JRZ9 810 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM214AQ32MH5 1076 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 METRNLQ641Q3 311 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 LRRC25Q8N386 305 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 DIRAS2Q96HU8 199 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF583Q96ND8 569 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 NEURL2Q9BR09 285 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZDHHC5Q9C0B5 715 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 PDE7BQ9NP56 450 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 DCAF13Q9NV06 445 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 MED16Q9Y2X0 877 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF99A8MXY4 864 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 HLA-DQA2P01906 255 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 PRG2P13727 222 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 PTNP21246 168 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 DCKP27707 260 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC6A12P48065 614 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 CD83Q01151 205 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 KIR2DS3Q14952 304 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 TOMM20Q15388 145 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 KIAA1614Q5VZ46 1190 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 METTL4Q8N3J2 472 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 DTX3Q8N9I9 347 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR2L5Q8NG80 312 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 PPP1R14BQ96C90 147 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZDHHC12Q96GR4 267 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 CPNE7Q9UBL6 633 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF221Q9UK13 617 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ANHXE9PGG2 379 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 H0Y8X5 98 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 COX10Q12887 443 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM196Q5HYL7 178 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM98AQ8NCA5 519 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 OSBPL10Q9BXB5 764 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 MAGIXQ9H6Y5 334 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 KAT8Q9H7Z6 458 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 Q9N2J8 555 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 C14orf119Q9NWQ9 140 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 GPN3Q9UHW5 284 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZFC3H1O60293 1989 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM240BA0A1B0GVZ2 78 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 CPSF4LA6NMK7 179 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 INHBBP09529 407 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 TPMTP51580 245 aa10.98□□□□□ -0.65
TRAPPC9-202ENST00000438773 SHC2P98077 582 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms