RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KCNK13Q9HB14 408 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 TCF7L2Q9NQB0 619 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 MRGBPQ9NV56 204 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 COPS7AQ9UBW8 275 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 CFL2Q9Y281 166 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 SCN3AQ9NY46 2000 aa13.93□□□□□ -0.18
GARNL3-204ENST00000429629 A0A087WV62 115 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 A8MUA0 341 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 UBDO15205 165 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 ATXN7O15265 892 aaPredicted RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 POLR3GO15318 223 aaPredicted RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 DIAPH2O60879 1101 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 ALDOCP09972 364 aaKnown RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 TROVE2P10155 538 aaKnown RBP eCLIP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 ITGAMP11215 1152 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 NTSP30990 170 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 MFAP5Q13361 173 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 CPTPQ5TA50 214 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 C6orf163Q5TEZ5 329 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 DGAT2L6Q6ZPD8 337 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 CCDC116Q8IYX3 515 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 C17orf47Q8NEP4 570 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 ZFP28Q8NHY6 868 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 NUBPLQ8TB37 319 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 HAS2Q92819 552 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 NCLNQ969V3 563 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 AMDHD1Q96NU7 426 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 OR52B2Q96RD2 323 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 NUDT9Q9BW91 350 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 DEFB126Q9BYW3 111 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 DPY30Q9C005 99 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 BHLHE41Q9C0J9 482 aaPredicted RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 SDR39U1Q9NRG7 319 aaPredicted RBP13.92□□□□□ -0.18
GARNL3-204ENST00000429629 ZIM2Q9NZV7 527 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 SH3BP4Q9P0V3 963 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 NTMQ9P121 344 aa13.92□□□□□ -0.18
GARNL3-204ENST00000429629 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 GOLGA8QA0A0J9YX86 632 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 GOLGA8OA6NCC3 632 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 A6NL46 340 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 GOLGA8NF8WBI6 632 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PDPK1O15530 556 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 VIMP08670 466 aaKnown RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 NT5EP21589 574 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PGDP52209 483 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 SLC37A1P57057 533 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PSPHP78330 225 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 LRRC74AQ0VAA2 488 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ZNF267Q14586 743 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 MEP1AQ16819 746 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 MPEG1Q2M385 716 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ZNF750Q32MQ0 723 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ZNF628Q5EBL2 1059 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ACER2Q5QJU3 275 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 NXNQ6DKJ4 435 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PCSK4Q6UW60 755 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 RPS19BP1Q86WX3 136 aaKnown RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 VWA5B2Q8N398 1253 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 SLC15A4Q8N697 577 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 CDC26Q8NHZ8 85 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PSMA8Q8TAA3 256 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 C9orf43Q8TAL5 461 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 BRIX1Q8TDN6 353 aaKnown RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 OR8D2Q9GZM6 311 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 SLC25A18Q9H1K4 315 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 CLMPQ9H6B4 373 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 STMN3Q9NZ72 180 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 MAT2BQ9NZL9 334 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 PTGFRNQ9P2B2 879 aa13.91□□□□□ -0.18
GARNL3-204ENST00000429629 ZNF223Q9UK11 482 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-204ENST00000429629 A0A1W2PS29 197 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 MASP2O00187 686 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 AKAP10O43572 662 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 FAM87AP0C7U9 286 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 TRHRP34981 398 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-204ENST00000429629 SOX18P35713 384 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 ATP4BP51164 291 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 RNF4P78317 190 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 PRSS53Q2L4Q9 553 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 ABHD17BQ5VST6 288 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 ANXA8L1Q5VT79 327 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 VPS37AQ8NEZ2 397 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 CLHC1Q8NHS4 586 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 OR5P2Q8WZ92 322 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 GFM2Q969S9 779 aaKnown RBP13.9□□□□□ -0.18
GARNL3-204ENST00000429629 TP53INP1Q96A56 240 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 CHMP6Q96FZ7 201 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 GLIPR2Q9H4G4 154 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 EPS8L2Q9H6S3 715 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 TRIM45Q9H8W5 580 aaPredicted RBP13.9□□□□□ -0.18
GARNL3-204ENST00000429629 ABI3Q9P2A4 366 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 MYOTQ9UBF9 498 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 PRODH2Q9UF12 536 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 TRIM33Q9UPN9 1127 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 YARS2Q9Y2Z4 477 aaKnown RBP13.9□□□□□ -0.18
GARNL3-204ENST00000429629 PCSK5Q92824 1860 aa13.9□□□□□ -0.18
GARNL3-204ENST00000429629 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms