RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 A0A1W2PRB8 838 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 NDUFS4O43181 175 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 C6orf47O95873 294 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 HPRP00739 348 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 JUNBP17275 347 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 MAGEA2P43356 314 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 IL1RL1Q01638 556 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 GAB1Q13480 694 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 C6orf141Q5SZD1 244 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 OR52N2Q8NGI0 321 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CREB3L4Q8TEY5 395 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 TBC1D20Q96BZ9 403 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 GTPBP2Q9BX10 602 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 BAG5Q9UL15 447 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CMPK1P30085 196 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 PCGF2P35227 344 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 AHRP35869 848 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CLK3P49761 638 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 RBBP4Q09028 425 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 FADDQ13158 208 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 ZIC1Q15915 447 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC23A3Q6PIS1 610 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC16A12Q6ZSM3 486 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CBLL1Q75N03 491 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 EIF3MQ7L2H7 374 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 ADCK2Q7Z695 626 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 RDH12Q96NR8 316 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC6A16Q9GZN6 736 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 RALGAPA1Q6GYQ0 2036 aa13.11□□□□□ -0.31
CSNK1E-201ENST00000359867 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 VIPP01282 170 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 C1QCP02747 245 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 MYF5P13349 255 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 NUBP1P53384 320 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 GPR18Q14330 331 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 GALNT5Q7Z7M9 940 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 ESX1Q8N693 406 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 FKBP10Q96AY3 582 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC35A5Q9BS91 424 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 NUP214P35658 2090 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 MITFO75030 526 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 CYP4B1P13584 511 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 TPTEP56180 551 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 HHEXQ03014 270 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 AMIGO1Q86WK6 493 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 ADGRF3Q8IZF5 1079 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 OR4E2Q8NGC2 313 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 OR5K1Q8NHB7 308 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 GPN2Q9H9Y4 310 aaPredicted RBP13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC6A20Q9NP91 592 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
CSNK1E-201ENST00000359867 LRIT2A6NDA9 550 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 PEBP1P30086 187 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 NR4A2P43354 598 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 MVDP53602 400 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 GP2P55259 537 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 UBE2IP63279 158 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 CCDC81Q6ZN84 652 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 LCN9Q8WX39 176 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC22A18Q96BI1 424 aa13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 SH3YL1Q96HL8 342 aaPredicted RBP13.09□□□□□ -0.31
CSNK1E-201ENST00000359867 DPH2Q9BQC3 489 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms