RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 SCN3AQ9NY46 2000 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 A0A0A6YYD5 115 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 A0A1W2PRB8 838 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 C1orf226A1L170 272 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 OR2A25A4D2G3 310 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 OXSR1O95747 527 aaPredicted RBP12.14□□□□□ -0.47
CLK3-201ENST00000345005 DRD2P14416 443 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 NME1P15531 152 aaKnown RBP12.14□□□□□ -0.47
CLK3-201ENST00000345005 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
CLK3-201ENST00000345005 PIGAP37287 484 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 GSSP48637 474 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 HYAL2Q12891 473 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 TOR1AIP1Q5JTV8 583 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 ZNF362Q5T0B9 420 aaPredicted RBP12.14□□□□□ -0.47
CLK3-201ENST00000345005 CPZQ66K79 652 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 GKN2Q86XP6 184 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 AMER2Q8N7J2 671 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 HPS1Q92902 700 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 LGALS12Q96DT0 336 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 C17orf62Q9BQA9 187 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 MIR1-1HGQ9H1L0 117 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 TPK1Q9H3S4 243 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 KLHL31Q9H511 634 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 TAS2R9Q9NYW1 312 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 TMEFF2Q9UIK5 374 aaPredicted RBP12.14□□□□□ -0.47
CLK3-201ENST00000345005 IFT52Q9Y366 437 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 KLK4Q9Y5K2 254 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 GMPPBQ9Y5P6 360 aa12.14□□□□□ -0.47
CLK3-201ENST00000345005 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 ERI3O43414 337 aaKnown RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 UPK1BO75841 260 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 KCNK5O95279 499 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 C6orf47O95873 294 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 PTTG1O95997 202 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 DCNP07585 359 aaKnown RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 ABCB1P08183 1280 aaPredicted RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 BMP4P12644 408 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 FPR1P21462 350 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 AGXTP21549 392 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 MAOBP27338 520 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 HBA1P69905 142 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 HHEXQ03014 270 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 RGS1Q08116 209 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 CAMK2BQ13554 666 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 SLC9A5Q14940 896 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 KDM4DQ6B0I6 523 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 OR2T5Q6IEZ7 315 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 FBXO42Q6P3S6 717 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 ABHD17CQ6PCB6 329 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 OR2T29Q8NH02 315 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 CIDECQ96AQ7 238 aaPredicted RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 ZHX1-C8orf76Q96EF9 292 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 TEFMQ96QE5 360 aaKnown RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 FAIM2Q9BWQ8 316 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 AICDAQ9GZX7 198 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 PRDM7Q9NQW5 492 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 HRASLS2Q9NWW9 162 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 OSGIN1Q9UJX0 560 aa12.13□□□□□ -0.47
CLK3-201ENST00000345005 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
CLK3-201ENST00000345005 B4DGG1 531 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 K7ESF4 209 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 TMPRSS11DO60235 418 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 SERPINA1P01009 418 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
CLK3-201ENST00000345005 MAGP20916 626 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 ATP5A1P25705 553 aaKnown RBP12.12□□□□□ -0.47
CLK3-201ENST00000345005 ALDH9A1P49189 494 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 DEFA1P59665 94 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 DEFA3P59666 94 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 TEKQ02763 1124 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 SLC14A1Q13336 389 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 MPEG1Q2M385 716 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 UBE2UQ5VVX9 321 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 MLIPQ5VWP3 458 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 ASPGQ86U10 573 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 C10orf111Q8N326 155 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 SDR16C5Q8N3Y7 309 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 ZNF540Q8NDQ6 660 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 MCFD2Q8NI22 146 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 NT5CQ8TCD5 201 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 SLC38A4Q969I6 547 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 DSN1Q9H410 356 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 IL1RAPQ9NPH3 570 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 EHD3Q9NZN3 535 aa12.12□□□□□ -0.47
CLK3-201ENST00000345005 ERVK-18Q9QC07 812 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms