RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 NDUFS4O43181 175 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 H1F0P07305 194 aaKnown RBP12.21□□□□□ -0.45
HIF3A-204ENST00000300862 ACP5P13686 325 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 GPC1P35052 558 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
HIF3A-204ENST00000300862 DMPKQ09013 629 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 EIF4HQ15056 248 aaKnown RBP12.21□□□□□ -0.45
HIF3A-204ENST00000300862 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 METRNLQ641Q3 311 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 PAQR6Q6TCH4 344 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.21□□□□□ -0.45
HIF3A-204ENST00000300862 GDPD3Q7L5L3 318 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 ATCAYQ86WG3 371 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 SLC34A3Q8N130 599 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 TCEANCQ8N8B7 351 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 SUSD6Q92537 303 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 COX14Q96I36 57 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.45
HIF3A-204ENST00000300862 KLHL31Q9H511 634 aa12.21□□□□□ -0.45
HIF3A-204ENST00000300862 MYO9BQ13459 2157 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 MN1Q10571 1320 aaPredicted RBP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 A0A1W2PS29 197 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 GPX5O75715 221 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 CHRM5P08912 532 aaPredicted RBP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 OSMP13725 252 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 S100A5P33763 92 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 UGT2B15P54855 530 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 RSBN1Q5VWQ0 802 aaPredicted RBP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 SLX4IPQ5VYV7 408 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 ZNF367Q7RTV3 350 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 C11orf74Q86VG3 221 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 BADQ92934 168 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 CRELD1Q96HD1 420 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 FERD3LQ96RJ6 166 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 DPH7Q9BTV6 452 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 CNPPD1Q9BV87 410 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 PRR14Q9BWN1 585 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 CDCA4Q9BXL8 241 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 AICDAQ9GZX7 198 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 OR51I1Q9H343 314 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 PRSS16Q9NQE7 514 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 IMP3Q9NV31 184 aaKnown RBP12.21□□□□□ -0.46
HIF3A-204ENST00000300862 HCN2Q9UL51 889 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 KCNK6Q9Y257 313 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 PLEKHM1Q9Y4G2 1056 aa12.21□□□□□ -0.46
HIF3A-204ENST00000300862 DSPPQ9NZW4 1301 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 HAT1O14929 419 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 GUCY1B2O75343 617 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ERAL1O75616 437 aaKnown RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 NR2F1P10589 423 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 NAT2P11245 290 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 XKP51811 444 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 LIMK1P53667 647 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 GPR19Q15760 415 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 PIP5KL1Q5T9C9 394 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 NDUFAF5Q5TEU4 345 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ZNF793Q6ZN11 406 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 NUDT13Q86X67 352 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ZBED6CLQ96FA7 236 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 C12orf66Q96MD2 445 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 QRSL1Q9H0R6 528 aaKnown RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 GLIPR2Q9H4G4 154 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 RERGLQ9H628 205 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ANKRA2Q9H9E1 313 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 FBXL12Q9NXK8 326 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 SERGEFQ9UGK8 458 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 RABL2BQ9UNT1 228 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 RFXAPO00287 272 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 KMOO15229 486 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 MID1O15344 667 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 CCNKO75909 580 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 SEMA3DO95025 777 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 APOL3O95236 402 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 PAK4O96013 591 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ADAP00813 363 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 CXCR2P25025 360 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 SSR2P43308 183 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 KCNJ5P48544 419 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 TGM4P49221 684 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 CSNK1G2P78368 415 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 OLR1P78380 273 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 REEP5Q00765 189 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ADGRD2Q7Z7M1 963 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 RGMAQ96B86 450 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 ZNF354BQ96LW1 612 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 SLC6A18Q96N87 628 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 OPALINQ96PE5 141 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 MARCH7Q9H992 704 aa12.2□□□□□ -0.46
HIF3A-204ENST00000300862 NEUROD4Q9HD90 331 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms