RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
CLIP1-219ENST00000620786 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
CLIP1-219ENST00000620786 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
CLIP1-219ENST00000620786 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 ZNF397Q8NF99 534 aaPredicted RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 CRNKL1Q9BZJ0 848 aaKnown RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
CLIP1-219ENST00000620786 KIF5BP33176 963 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
CLIP1-219ENST00000620786 GOLGA6L10A6NI86 522 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
CLIP1-219ENST00000620786 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 TRMT1LQ7Z2T5 733 aaKnown RBP13.23□□□□□ -0.29
CLIP1-219ENST00000620786 KIAA1328Q86T90 577 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 A2MP01023 1474 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 PPM1FP49593 454 aaPredicted RBP13.23□□□□□ -0.29
CLIP1-219ENST00000620786 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLIP1-219ENST00000620786 ANXA1P04083 346 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
CLIP1-219ENST00000620786 IL2RBP14784 551 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
CLIP1-219ENST00000620786 CAMK4Q16566 473 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 TAF4BQ92750 862 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 PLCH2O75038 1416 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
CLIP1-219ENST00000620786 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
CLIP1-219ENST00000620786 DUOX2Q9NRD8 1548 aa13.22□□□□□ -0.29
CLIP1-219ENST00000620786 FBLN1P23142 703 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 FKBP15Q5T1M5 1219 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
CLIP1-219ENST00000620786 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.29
CLIP1-219ENST00000620786 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
CLIP1-219ENST00000620786 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
CLIP1-219ENST00000620786 PICALMQ13492 652 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.29
CLIP1-219ENST00000620786 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
CLIP1-219ENST00000620786 HAND2P61296 217 aa13.21□□□□□ -0.3
CLIP1-219ENST00000620786 ENOX2Q16206 610 aaKnown RBP13.21□□□□□ -0.3
CLIP1-219ENST00000620786 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 CETN2P41208 172 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CLIP1-219ENST00000620786 MPNDQ8N594 471 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
CLIP1-219ENST00000620786 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 NF2P35240 595 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
CLIP1-219ENST00000620786 CYP7A1P22680 504 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
CLIP1-219ENST00000620786 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
CLIP1-219ENST00000620786 CA8P35219 290 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
CLIP1-219ENST00000620786 CACNA2D4Q7Z3S7 1137 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 KIF20AO95235 890 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
CLIP1-219ENST00000620786 TRIM27P14373 513 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
CLIP1-219ENST00000620786 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
CLIP1-219ENST00000620786 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
CLIP1-219ENST00000620786 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
CLIP1-219ENST00000620786 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
CLIP1-219ENST00000620786 MAP7D2Q96T17 732 aa13.18□□□□□ -0.3
CLIP1-219ENST00000620786 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
CLIP1-219ENST00000620786 SPA17Q15506 151 aa13.18□□□□□ -0.3
CLIP1-219ENST00000620786 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms