RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NEURL1BA8MQ27 555 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 ATP5J2-PTCD1G3V325 749 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 PDE4AP27815 886 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 BCL11AQ9H165 835 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 DCTPP1Q9H773 170 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 PALLDQ8WX93 1383 aa25.5■■□□□ 1.67
SNRPA1-205ENST00000558036 ONECUT3O60422 494 aaPredicted RBP25.49■■□□□ 1.67
SNRPA1-205ENST00000558036 LOC102724428A0A0B4J2F2 783 aa25.49■■□□□ 1.67
SNRPA1-205ENST00000558036 ATP6V1AP38606 617 aa25.49■■□□□ 1.67
SNRPA1-205ENST00000558036 SIK1P57059 783 aa25.49■■□□□ 1.67
SNRPA1-205ENST00000558036 CHD1LQ86WJ1 897 aa25.49■■□□□ 1.67
SNRPA1-205ENST00000558036 ZBTB1Q9Y2K1 713 aa25.48■■□□□ 1.67
SNRPA1-205ENST00000558036 APBB1O00213 710 aa25.48■■□□□ 1.67
SNRPA1-205ENST00000558036 GRM8O00222 908 aa25.47■■□□□ 1.67
SNRPA1-205ENST00000558036 ARXQ96QS3 562 aa25.47■■□□□ 1.67
SNRPA1-205ENST00000558036 HMMRO75330 724 aa25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 ATP8B2P98198 1209 aa25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 TJP1Q07157 1748 aa25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 ITPK1Q13572 414 aa25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 GCKRQ14397 625 aa25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 JARID2Q92833 1246 aaPredicted RBP25.46■■□□□ 1.67
SNRPA1-205ENST00000558036 ARFGEF2Q9Y6D5 1785 aa25.45■■□□□ 1.67
SNRPA1-205ENST00000558036 RBM19Q9Y4C8 960 aaKnown RBP25.45■■□□□ 1.66
SNRPA1-205ENST00000558036 KCNQ4P56696 695 aa25.45■■□□□ 1.66
SNRPA1-205ENST00000558036 PPP1R42Q7Z4L9 355 aa25.44■■□□□ 1.66
SNRPA1-205ENST00000558036 EXOC6BQ9Y2D4 811 aa25.43■■□□□ 1.66
SNRPA1-205ENST00000558036 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
SNRPA1-205ENST00000558036 SUCLG2Q96I99 432 aa25.42■■□□□ 1.66
SNRPA1-205ENST00000558036 SRGAP3O43295 1099 aa25.42■■□□□ 1.66
SNRPA1-205ENST00000558036 KAZALD1Q96I82 304 aa25.42■■□□□ 1.66
SNRPA1-205ENST00000558036 UTYO14607 1347 aa25.42■■□□□ 1.66
SNRPA1-205ENST00000558036 SMARCA5O60264 1052 aaPredicted RBP25.41■■□□□ 1.66
SNRPA1-205ENST00000558036 CRKLP46109 303 aaKnown RBP25.4■■□□□ 1.66
SNRPA1-205ENST00000558036 INTS5Q6P9B9 1019 aaKnown RBP25.4■■□□□ 1.66
SNRPA1-205ENST00000558036 KIF6Q6ZMV9 814 aa25.4■■□□□ 1.66
SNRPA1-205ENST00000558036 BACH2Q9BYV9 841 aa25.4■■□□□ 1.66
SNRPA1-205ENST00000558036 NUP188Q5SRE5 1749 aa25.39■■□□□ 1.66
SNRPA1-205ENST00000558036 UBE3BQ7Z3V4 1068 aa25.39■■□□□ 1.66
SNRPA1-205ENST00000558036 SSH3Q8TE77 659 aa25.39■■□□□ 1.66
SNRPA1-205ENST00000558036 BICC1Q9H694 974 aaKnown RBP25.39■■□□□ 1.66
SNRPA1-205ENST00000558036 A0A087WZG4 1122 aa25.39■■□□□ 1.65
SNRPA1-205ENST00000558036 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.65
SNRPA1-205ENST00000558036 CCDC87Q9NVE4 849 aa25.39■■□□□ 1.65
SNRPA1-205ENST00000558036 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
SNRPA1-205ENST00000558036 POLA2Q14181 598 aa25.37■■□□□ 1.65
SNRPA1-205ENST00000558036 TBC1D2BQ9UPU7 963 aa25.37■■□□□ 1.65
SNRPA1-205ENST00000558036 IL6STP40189 918 aaPredicted RBP25.37■■□□□ 1.65
SNRPA1-205ENST00000558036 HLFQ16534 295 aa25.37■■□□□ 1.65
SNRPA1-205ENST00000558036 C8orf34Q49A92 452 aa25.37■■□□□ 1.65
SNRPA1-205ENST00000558036 EPHA10Q5JZY3 1008 aa25.36■■□□□ 1.65
SNRPA1-205ENST00000558036 MAP3K15Q6ZN16 1313 aa25.36■■□□□ 1.65
SNRPA1-205ENST00000558036 FAM161AQ3B820 660 aa25.36■■□□□ 1.65
SNRPA1-205ENST00000558036 LINC00116Q8NCU8 138 aa25.35■■□□□ 1.65
SNRPA1-205ENST00000558036 OTUD7AQ8TE49 926 aaPredicted RBP25.35■■□□□ 1.65
SNRPA1-205ENST00000558036 CWC25Q9NXE8 425 aaPredicted RBP25.35■■□□□ 1.65
SNRPA1-205ENST00000558036 NHSQ6T4R5 1651 aa25.35■■□□□ 1.65
SNRPA1-205ENST00000558036 AFDNP55196 1824 aaKnown RBP25.35■■□□□ 1.65
SNRPA1-205ENST00000558036 TCIRG1Q13488 830 aa25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 ZNF772Q68DY9 489 aaPredicted RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 NPM2Q86SE8 214 aaKnown RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 ZBTB47Q9UFB7 747 aaPredicted RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 IBTKQ9P2D0 1353 aaPredicted RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 BTAF1O14981 1849 aa25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 SURF6O75683 361 aaKnown RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 MTX1Q13505 466 aa25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
SNRPA1-205ENST00000558036 EIF5P55010 431 aaKnown RBP25.33■■□□□ 1.65
SNRPA1-205ENST00000558036 KRT27Q7Z3Y8 459 aa25.33■■□□□ 1.65
SNRPA1-205ENST00000558036 HDAC5Q9UQL6 1122 aa25.33■■□□□ 1.65
SNRPA1-205ENST00000558036 CASP7P55210 303 aa25.33■■□□□ 1.64
SNRPA1-205ENST00000558036 CCDC191Q8NCU4 936 aa25.32■■□□□ 1.64
SNRPA1-205ENST00000558036 ISCA1Q9BUE6 129 aa25.32■■□□□ 1.64
SNRPA1-205ENST00000558036 GPTP24298 496 aa25.31■■□□□ 1.64
SNRPA1-205ENST00000558036 GIGYF2Q6Y7W6 1299 aaKnown RBP25.31■■□□□ 1.64
SNRPA1-205ENST00000558036 PA2G4Q9UQ80 394 aaKnown RBP25.31■■□□□ 1.64
SNRPA1-205ENST00000558036 RBM6P78332 1123 aaKnown RBP25.31■■□□□ 1.64
SNRPA1-205ENST00000558036 H7C1W4 665 aa25.3■■□□□ 1.64
SNRPA1-205ENST00000558036 LRRCC1Q9C099 1032 aa25.3■■□□□ 1.64
SNRPA1-205ENST00000558036 MYH14Q7Z406 1995 aaKnown RBP25.29■■□□□ 1.64
SNRPA1-205ENST00000558036 SMIM5Q71RC9 77 aa25.29■■□□□ 1.64
SNRPA1-205ENST00000558036 PLEKHM2Q8IWE5 1019 aa25.29■■□□□ 1.64
SNRPA1-205ENST00000558036 CICQ96RK0 1608 aaPredicted RBP25.29■■□□□ 1.64
SNRPA1-205ENST00000558036 CCNL1Q9UK58 526 aaPredicted RBP25.28■■□□□ 1.64
SNRPA1-205ENST00000558036 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
SNRPA1-205ENST00000558036 IL1RAPL2Q9NP60 686 aa25.28■■□□□ 1.64
SNRPA1-205ENST00000558036 BRWD3Q6RI45 1802 aa25.27■■□□□ 1.64
SNRPA1-205ENST00000558036 SBF2Q86WG5 1849 aa25.27■■□□□ 1.64
SNRPA1-205ENST00000558036 KLHDC4Q8TBB5 520 aa25.27■■□□□ 1.64
SNRPA1-205ENST00000558036 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
SNRPA1-205ENST00000558036 FAM196AQ6ZSG2 479 aa25.26■■□□□ 1.63
SNRPA1-205ENST00000558036 ERVV-1B6SEH8 477 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 TRIM37O94972 964 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 TRIM28Q13263 835 aaKnown RBP25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 FAM89AQ96GI7 184 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 RREB1Q92766 1687 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 OS9Q13438 667 aaPredicted RBP25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 NLRP10Q86W26 655 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 COL15A1P39059 1388 aa25.25■■□□□ 1.63
SNRPA1-205ENST00000558036 FOXO4P98177 505 aa25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 SYNE4Q8N205 404 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms