RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 NEXNQ0ZGT2 675 aa23.2■■□□□ 1.3
SDR39U1-218ENST00000556262 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
SDR39U1-218ENST00000556262 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
SDR39U1-218ENST00000556262 VSIG10Q8N0Z9 540 aa23.2■■□□□ 1.3
SDR39U1-218ENST00000556262 NEURL1BA8MQ27 555 aa23.2■■□□□ 1.3
SDR39U1-218ENST00000556262 ARFGEF2Q9Y6D5 1785 aa23.19■■□□□ 1.3
SDR39U1-218ENST00000556262 GRM8O00222 908 aa23.19■■□□□ 1.3
SDR39U1-218ENST00000556262 MEX3CQ5U5Q3 659 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-218ENST00000556262 PLBD2Q8NHP8 589 aa23.18■■□□□ 1.3
SDR39U1-218ENST00000556262 SSH3Q8TE77 659 aa23.18■■□□□ 1.3
SDR39U1-218ENST00000556262 DDRGK1Q96HY6 314 aa23.18■■□□□ 1.3
SDR39U1-218ENST00000556262 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
SDR39U1-218ENST00000556262 SRGAP3O43295 1099 aa23.17■■□□□ 1.3
SDR39U1-218ENST00000556262 SEC24BO95487 1268 aa23.17■■□□□ 1.3
SDR39U1-218ENST00000556262 OTUD7AQ8TE49 926 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-218ENST00000556262 TEX13AQ9BXU3 409 aaPredicted RBP23.17■■□□□ 1.3
SDR39U1-218ENST00000556262 GCKRQ14397 625 aa23.16■■□□□ 1.3
SDR39U1-218ENST00000556262 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-218ENST00000556262 UTYO14607 1347 aa23.15■■□□□ 1.3
SDR39U1-218ENST00000556262 STARD3NLO95772 234 aa23.15■■□□□ 1.3
SDR39U1-218ENST00000556262 POLA2Q14181 598 aa23.15■■□□□ 1.3
SDR39U1-218ENST00000556262 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
SDR39U1-218ENST00000556262 SUCLG2Q96I99 432 aa23.15■■□□□ 1.3
SDR39U1-218ENST00000556262 KAZALD1Q96I82 304 aa23.14■■□□□ 1.3
SDR39U1-218ENST00000556262 ZBTB3Q9H5J0 574 aa23.14■■□□□ 1.3
SDR39U1-218ENST00000556262 AFDNP55196 1824 aaKnown RBP23.14■■□□□ 1.3
SDR39U1-218ENST00000556262 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.29
SDR39U1-218ENST00000556262 KCNQ2O43526 872 aa23.13■■□□□ 1.29
SDR39U1-218ENST00000556262 IBTKQ9P2D0 1353 aaPredicted RBP23.13■■□□□ 1.29
SDR39U1-218ENST00000556262 CYP19A1P11511 503 aaPredicted RBP23.12■■□□□ 1.29
SDR39U1-218ENST00000556262 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-218ENST00000556262 NUP188Q5SRE5 1749 aa23.12■■□□□ 1.29
SDR39U1-218ENST00000556262 BICC1Q9H694 974 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-218ENST00000556262 AFF2P51816 1311 aa23.12■■□□□ 1.29
SDR39U1-218ENST00000556262 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-218ENST00000556262 BMP2KLQ5H9B9 411 aa23.11■■□□□ 1.29
SDR39U1-218ENST00000556262 LRRCC1Q9C099 1032 aa23.11■■□□□ 1.29
SDR39U1-218ENST00000556262 MTX1Q13505 466 aa23.1■■□□□ 1.29
SDR39U1-218ENST00000556262 HDAC5Q9UQL6 1122 aa23.1■■□□□ 1.29
SDR39U1-218ENST00000556262 TJP1Q07157 1748 aa23.09■■□□□ 1.29
SDR39U1-218ENST00000556262 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
SDR39U1-218ENST00000556262 ARXQ96QS3 562 aa23.09■■□□□ 1.29
SDR39U1-218ENST00000556262 ZBTB1Q9Y2K1 713 aa23.09■■□□□ 1.29
SDR39U1-218ENST00000556262 A0A087WZG4 1122 aa23.08■■□□□ 1.29
SDR39U1-218ENST00000556262 GSPT1P15170 499 aaKnown RBP23.08■■□□□ 1.29
SDR39U1-218ENST00000556262 EPHA10Q5JZY3 1008 aa23.08■■□□□ 1.29
SDR39U1-218ENST00000556262 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
SDR39U1-218ENST00000556262 PA2G4Q9UQ80 394 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-218ENST00000556262 ATP6V1AP38606 617 aa23.06■■□□□ 1.28
SDR39U1-218ENST00000556262 FAM182BQ5T319 152 aa23.06■■□□□ 1.28
SDR39U1-218ENST00000556262 IL1RAPL2Q9NP60 686 aa23.06■■□□□ 1.28
SDR39U1-218ENST00000556262 LOC102724428A0A0B4J2F2 783 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 SIK1P57059 783 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 TTC22Q5TAA0 569 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 THSD7AQ9UPZ6 1657 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 KIF6Q6ZMV9 814 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 PALLDQ8WX93 1383 aa23.05■■□□□ 1.28
SDR39U1-218ENST00000556262 RAB11FIP3O75154 756 aa23.04■■□□□ 1.28
SDR39U1-218ENST00000556262 CASP7P55210 303 aa23.04■■□□□ 1.28
SDR39U1-218ENST00000556262 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
SDR39U1-218ENST00000556262 TSHZ3Q63HK5 1081 aa23.03■■□□□ 1.28
SDR39U1-218ENST00000556262 RHPN1Q8TCX5 695 aa23.03■■□□□ 1.28
SDR39U1-218ENST00000556262 PDE1AP54750 535 aa23.03■■□□□ 1.28
SDR39U1-218ENST00000556262 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SDR39U1-218ENST00000556262 SALL3Q9BXA9 1300 aa23.02■■□□□ 1.28
SDR39U1-218ENST00000556262 H7C1W4 665 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 OS9Q13438 667 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 TCIRG1Q13488 830 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 KIF1BPQ96EK5 621 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 EP400Q96L91 3159 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 MAP3K15Q6ZN16 1313 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 HLFQ16534 295 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 INTS5Q6P9B9 1019 aaKnown RBP23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 TRPC5Q9UL62 973 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 ATRNO75882 1429 aa23.01■■□□□ 1.27
SDR39U1-218ENST00000556262 KLHDC4Q8TBB5 520 aa23■■□□□ 1.27
SDR39U1-218ENST00000556262 OSBPL3Q9H4L5 887 aa23■■□□□ 1.27
SDR39U1-218ENST00000556262 MX1P20591 662 aa23■■□□□ 1.27
SDR39U1-218ENST00000556262 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
SDR39U1-218ENST00000556262 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
SDR39U1-218ENST00000556262 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
SDR39U1-218ENST00000556262 HSP90AB4PQ58FF6 505 aa23■■□□□ 1.27
SDR39U1-218ENST00000556262 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
SDR39U1-218ENST00000556262 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
SDR39U1-218ENST00000556262 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
SDR39U1-218ENST00000556262 MYH14Q7Z406 1995 aaKnown RBP22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 GIGYF2Q6Y7W6 1299 aaKnown RBP22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 TBC1D9Q6ZT07 1266 aa22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 SIL1Q9H173 461 aa22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 SDSP20132 328 aa22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 RABL6Q3YEC7 729 aaPredicted RBP22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 COL15A1P39059 1388 aa22.98■■□□□ 1.27
SDR39U1-218ENST00000556262 KCNQ4P56696 695 aa22.97■■□□□ 1.27
SDR39U1-218ENST00000556262 QTRT2Q9H974 415 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms