RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 NBPF14Q5TI25 921 aa24.37■■□□□ 1.49
MTA1-220ENST00000552286 NBPF10Q6P3W6 841 aaKnown RBP24.37■■□□□ 1.49
MTA1-220ENST00000552286 NBPF15Q8N660 670 aa24.37■■□□□ 1.49
MTA1-220ENST00000552286 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
MTA1-220ENST00000552286 DNAAF4Q8WXU2 420 aa24.37■■□□□ 1.49
MTA1-220ENST00000552286 DDX58O95786 925 aaKnown RBP24.36■■□□□ 1.49
MTA1-220ENST00000552286 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
MTA1-220ENST00000552286 STARD3NLO95772 234 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 MFAP1P55081 439 aaKnown RBP24.35■■□□□ 1.49
MTA1-220ENST00000552286 COPS6Q7L5N1 327 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 USP44Q9H0E7 712 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 KSR2Q6VAB6 950 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 SMARCC1Q92922 1105 aaPredicted RBP24.35■■□□□ 1.49
MTA1-220ENST00000552286 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
MTA1-220ENST00000552286 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 SIK1P57059 783 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 KRT27Q7Z3Y8 459 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 SRCIN1Q9C0H9 1055 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 ATP8B2P98198 1209 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 C16orf71Q8IYS4 520 aaPredicted RBP24.33■■□□□ 1.49
MTA1-220ENST00000552286 C22orf23Q9BZE7 217 aa24.33■■□□□ 1.49
MTA1-220ENST00000552286 CICQ96RK0 1608 aaPredicted RBP24.33■■□□□ 1.48
MTA1-220ENST00000552286 ARFGEF2Q9Y6D5 1785 aa24.32■■□□□ 1.48
MTA1-220ENST00000552286 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
MTA1-220ENST00000552286 ATP6V1AP38606 617 aa24.31■■□□□ 1.48
MTA1-220ENST00000552286 RIC3Q7Z5B4 369 aa24.31■■□□□ 1.48
MTA1-220ENST00000552286 UBTFL1P0CB47 393 aaPredicted RBP24.31■■□□□ 1.48
MTA1-220ENST00000552286 BEND3Q5T5X7 828 aa24.31■■□□□ 1.48
MTA1-220ENST00000552286 LRRFIP2Q9Y608 721 aaKnown RBP24.31■■□□□ 1.48
MTA1-220ENST00000552286 SMARCA5O60264 1052 aaPredicted RBP24.3■■□□□ 1.48
MTA1-220ENST00000552286 APBB1O00213 710 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 GSPT1P15170 499 aaKnown RBP24.29■■□□□ 1.48
MTA1-220ENST00000552286 RXRBP28702 533 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 ANKRD13DQ6ZTN6 518 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 ZNF831Q5JPB2 1677 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 PNMA6EA0A0J9YXQ4 647 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 BECN1Q14457 450 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 NBR1Q14596 966 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 TTC22Q5TAA0 569 aa24.29■■□□□ 1.48
MTA1-220ENST00000552286 RGS17Q9UGC6 210 aaPredicted RBP24.29■■□□□ 1.48
MTA1-220ENST00000552286 ZNF330Q9Y3S2 320 aaPredicted RBP24.29■■□□□ 1.48
MTA1-220ENST00000552286 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
MTA1-220ENST00000552286 NUP188Q5SRE5 1749 aa24.28■■□□□ 1.48
MTA1-220ENST00000552286 COL5A3P25940 1745 aaPredicted RBP24.27■■□□□ 1.48
MTA1-220ENST00000552286 ITPK1Q13572 414 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 FAM196AQ6ZSG2 479 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 TBC1D9Q6ZT07 1266 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 TTLL7Q6ZT98 887 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 ZBTB1Q9Y2K1 713 aa24.27■■□□□ 1.48
MTA1-220ENST00000552286 EXOC6BQ9Y2D4 811 aa24.26■■□□□ 1.47
MTA1-220ENST00000552286 PLBD2Q8NHP8 589 aa24.25■■□□□ 1.47
MTA1-220ENST00000552286 CDC45O75419 566 aa24.25■■□□□ 1.47
MTA1-220ENST00000552286 NEXNQ0ZGT2 675 aa24.24■■□□□ 1.47
MTA1-220ENST00000552286 CWF19L2Q2TBE0 894 aaKnown RBP24.24■■□□□ 1.47
MTA1-220ENST00000552286 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
MTA1-220ENST00000552286 METTL22Q9BUU2 404 aaPredicted RBP24.24■■□□□ 1.47
MTA1-220ENST00000552286 BCL11BQ9C0K0 894 aaPredicted RBP24.24■■□□□ 1.47
MTA1-220ENST00000552286 LY75O60449 1722 aa24.24■■□□□ 1.47
MTA1-220ENST00000552286 RREB1Q92766 1687 aa24.24■■□□□ 1.47
MTA1-220ENST00000552286 ALDH1L1O75891 902 aa24.23■■□□□ 1.47
MTA1-220ENST00000552286 NBPF7P0C2Y1 421 aaPredicted RBP24.23■■□□□ 1.47
MTA1-220ENST00000552286 RBM25P49756 843 aaKnown RBP24.23■■□□□ 1.47
MTA1-220ENST00000552286 POTEAQ6S8J7 498 aa24.23■■□□□ 1.47
MTA1-220ENST00000552286 MYD88Q99836 296 aa24.23■■□□□ 1.47
MTA1-220ENST00000552286 AFDNP55196 1824 aaKnown RBP24.23■■□□□ 1.47
MTA1-220ENST00000552286 IBTKQ9P2D0 1353 aaPredicted RBP24.23■■□□□ 1.47
MTA1-220ENST00000552286 SSH3Q8TE77 659 aa24.23■■□□□ 1.47
MTA1-220ENST00000552286 MYH14Q7Z406 1995 aaKnown RBP24.22■■□□□ 1.47
MTA1-220ENST00000552286 CRKLP46109 303 aaKnown RBP24.22■■□□□ 1.47
MTA1-220ENST00000552286 LRRCC1Q9C099 1032 aa24.22■■□□□ 1.47
MTA1-220ENST00000552286 ZBTB3Q9H5J0 574 aa24.22■■□□□ 1.47
MTA1-220ENST00000552286 CCDC87Q9NVE4 849 aa24.22■■□□□ 1.47
MTA1-220ENST00000552286 OSBPL3Q9H4L5 887 aa24.22■■□□□ 1.47
MTA1-220ENST00000552286 IGKV5-2P06315 115 aa24.21■■□□□ 1.47
MTA1-220ENST00000552286 KCNQ4P56696 695 aa24.21■■□□□ 1.47
MTA1-220ENST00000552286 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.46
MTA1-220ENST00000552286 INTS5Q6P9B9 1019 aaKnown RBP24.2■■□□□ 1.46
MTA1-220ENST00000552286 KIF6Q6ZMV9 814 aa24.2■■□□□ 1.46
MTA1-220ENST00000552286 ARXQ96QS3 562 aa24.2■■□□□ 1.46
MTA1-220ENST00000552286 POLA2Q14181 598 aa24.2■■□□□ 1.46
MTA1-220ENST00000552286 PPP1R42Q7Z4L9 355 aa24.2■■□□□ 1.46
MTA1-220ENST00000552286 TBC1D2Q9BYX2 928 aa24.2■■□□□ 1.46
MTA1-220ENST00000552286 NEURL1BA8MQ27 555 aa24.19■■□□□ 1.46
MTA1-220ENST00000552286 TRIM37O94972 964 aa24.19■■□□□ 1.46
MTA1-220ENST00000552286 LINC00116Q8NCU8 138 aa24.19■■□□□ 1.46
MTA1-220ENST00000552286 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
MTA1-220ENST00000552286 PDE1AP54750 535 aa24.18■■□□□ 1.46
MTA1-220ENST00000552286 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
MTA1-220ENST00000552286 SALL3Q9BXA9 1300 aa24.18■■□□□ 1.46
MTA1-220ENST00000552286 SDSP20132 328 aa24.18■■□□□ 1.46
MTA1-220ENST00000552286 ATP5J2-PTCD1G3V325 749 aa24.17■■□□□ 1.46
MTA1-220ENST00000552286 EIF5BO60841 1220 aaKnown RBP24.17■■□□□ 1.46
MTA1-220ENST00000552286 TAF1LQ8IZX4 1826 aa24.16■■□□□ 1.46
MTA1-220ENST00000552286 GRM8O00222 908 aa24.16■■□□□ 1.46
MTA1-220ENST00000552286 SRGAP3O43295 1099 aa24.16■■□□□ 1.46
MTA1-220ENST00000552286 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
MTA1-220ENST00000552286 MAP3K15Q6ZN16 1313 aa24.16■■□□□ 1.46
MTA1-220ENST00000552286 RAB11FIP3O75154 756 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms