RNA–Protein interactions for RNA: ENST00000490104.5

TSN-208, Transcript of translin, humanhuman

TSL 2

Gene TSN, Length 2,717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-208ENST00000490104 HLFQ16534 295 aa17.5■□□□□ 0.39
TSN-208ENST00000490104 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
TSN-208ENST00000490104 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
TSN-208ENST00000490104 CCNL1Q9UK58 526 aaPredicted RBP17.5■□□□□ 0.39
TSN-208ENST00000490104 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
TSN-208ENST00000490104 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
TSN-208ENST00000490104 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
TSN-208ENST00000490104 AMIGO3Q86WK7 504 aa17.49■□□□□ 0.39
TSN-208ENST00000490104 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
TSN-208ENST00000490104 BTAF1O14981 1849 aa17.48■□□□□ 0.39
TSN-208ENST00000490104 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
TSN-208ENST00000490104 PHF14O94880 888 aa17.48■□□□□ 0.39
TSN-208ENST00000490104 NEXNQ0ZGT2 675 aa17.48■□□□□ 0.39
TSN-208ENST00000490104 CEP85Q6P2H3 762 aa17.48■□□□□ 0.39
TSN-208ENST00000490104 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
TSN-208ENST00000490104 GNAI2P04899 355 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
TSN-208ENST00000490104 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
TSN-208ENST00000490104 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 LRRC4BQ9NT99 713 aa17.47■□□□□ 0.39
TSN-208ENST00000490104 FAM196AQ6ZSG2 479 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 LINS1Q8NG48 757 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 TJP1Q07157 1748 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 UTRNP46939 3433 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
TSN-208ENST00000490104 KIF6Q6ZMV9 814 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
TSN-208ENST00000490104 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
TSN-208ENST00000490104 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
TSN-208ENST00000490104 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
TSN-208ENST00000490104 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
TSN-208ENST00000490104 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
TSN-208ENST00000490104 A0A087WZG4 1122 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 GNPATO15228 680 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
TSN-208ENST00000490104 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
TSN-208ENST00000490104 GRM8O00222 908 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
TSN-208ENST00000490104 GNAI3P08754 354 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 GCKRQ14397 625 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 SUCLG2Q96I99 432 aa17.44■□□□□ 0.38
TSN-208ENST00000490104 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 SBF2Q86WG5 1849 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 BICDL1Q6ZP65 573 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
TSN-208ENST00000490104 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 APBA3O96018 575 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
TSN-208ENST00000490104 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
TSN-208ENST00000490104 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 CHMP4BQ9H444 224 aaKnown RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
TSN-208ENST00000490104 NHSQ6T4R5 1651 aa17.41■□□□□ 0.38
TSN-208ENST00000490104 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
TSN-208ENST00000490104 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 PXDNLA1KZ92 1463 aa17.41■□□□□ 0.38
TSN-208ENST00000490104 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
TSN-208ENST00000490104 IL6STP40189 918 aaPredicted RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 EIF5P55010 431 aaKnown RBP17.41■□□□□ 0.38
TSN-208ENST00000490104 AAMPQ13685 434 aa17.4■□□□□ 0.38
TSN-208ENST00000490104 SIL1Q9H173 461 aa17.4■□□□□ 0.38
TSN-208ENST00000490104 ALDH1L1O75891 902 aa17.39■□□□□ 0.37
TSN-208ENST00000490104 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
TSN-208ENST00000490104 C16orf71Q8IYS4 520 aaPredicted RBP17.39■□□□□ 0.37
TSN-208ENST00000490104 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.37
TSN-208ENST00000490104 COL15A1P39059 1388 aa17.38■□□□□ 0.37
TSN-208ENST00000490104 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
TSN-208ENST00000490104 PROM2Q8N271 834 aa17.38■□□□□ 0.37
TSN-208ENST00000490104 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
TSN-208ENST00000490104 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
TSN-208ENST00000490104 OTUD7AQ8TE49 926 aaPredicted RBP17.38■□□□□ 0.37
TSN-208ENST00000490104 PDE4AP27815 886 aa17.37■□□□□ 0.37
TSN-208ENST00000490104 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
TSN-208ENST00000490104 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
TSN-208ENST00000490104 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
TSN-208ENST00000490104 UBN2Q6ZU65 1347 aa17.37■□□□□ 0.37
TSN-208ENST00000490104 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 AK7Q96M32 723 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 SURF6O75683 361 aaKnown RBP17.36■□□□□ 0.37
TSN-208ENST00000490104 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 TXNRD1Q16881 649 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
TSN-208ENST00000490104 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
TSN-208ENST00000490104 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
TSN-208ENST00000490104 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
TSN-208ENST00000490104 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
TSN-208ENST00000490104 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
TSN-208ENST00000490104 NUP188Q5SRE5 1749 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms