RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SLC4A9Q96Q91 983 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 MYD88Q99836 296 aa25.13■■□□□ 1.61
NECAB3-213ENST00000488489 RBM42Q9BTD8 480 aaKnown RBP25.13■■□□□ 1.61
NECAB3-213ENST00000488489 NEURL1BA8MQ27 555 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 GRM8O00222 908 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 FAM98CQ17RN3 349 aaKnown RBP25.12■■□□□ 1.61
NECAB3-213ENST00000488489 NEXNQ0ZGT2 675 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 TTLL7Q6ZT98 887 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 PLEKHM2Q8IWE5 1019 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 OTUD7AQ8TE49 926 aaPredicted RBP25.12■■□□□ 1.61
NECAB3-213ENST00000488489 UTYO14607 1347 aa25.12■■□□□ 1.61
NECAB3-213ENST00000488489 POLA2Q14181 598 aa25.11■■□□□ 1.61
NECAB3-213ENST00000488489 PLBD2Q8NHP8 589 aa25.11■■□□□ 1.61
NECAB3-213ENST00000488489 ARFGEF2Q9Y6D5 1785 aa25.1■■□□□ 1.61
NECAB3-213ENST00000488489 SRGAP3O43295 1099 aa25.1■■□□□ 1.61
NECAB3-213ENST00000488489 KAZALD1Q96I82 304 aa25.1■■□□□ 1.61
NECAB3-213ENST00000488489 GCKRQ14397 625 aa25.09■■□□□ 1.61
NECAB3-213ENST00000488489 ACSBG1Q96GR2 724 aa25.09■■□□□ 1.61
NECAB3-213ENST00000488489 IBTKQ9P2D0 1353 aaPredicted RBP25.09■■□□□ 1.61
NECAB3-213ENST00000488489 TEX13AQ9BXU3 409 aaPredicted RBP25.09■■□□□ 1.61
NECAB3-213ENST00000488489 BMP2KLQ5H9B9 411 aa25.08■■□□□ 1.61
NECAB3-213ENST00000488489 USP21Q9UK80 565 aa25.07■■□□□ 1.6
NECAB3-213ENST00000488489 MTX1Q13505 466 aa25.07■■□□□ 1.6
NECAB3-213ENST00000488489 SUCLG2Q96I99 432 aa25.07■■□□□ 1.6
NECAB3-213ENST00000488489 ATP5J2-PTCD1G3V325 749 aa25.06■■□□□ 1.6
NECAB3-213ENST00000488489 LRRCC1Q9C099 1032 aa25.05■■□□□ 1.6
NECAB3-213ENST00000488489 STARD3NLO95772 234 aa25.04■■□□□ 1.6
NECAB3-213ENST00000488489 NUP188Q5SRE5 1749 aa25.04■■□□□ 1.6
NECAB3-213ENST00000488489 A0A0G2JS52 829 aa25.04■■□□□ 1.6
NECAB3-213ENST00000488489 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
NECAB3-213ENST00000488489 ZBTB3Q9H5J0 574 aa25.04■■□□□ 1.6
NECAB3-213ENST00000488489 BICC1Q9H694 974 aaKnown RBP25.04■■□□□ 1.6
NECAB3-213ENST00000488489 AFDNP55196 1824 aaKnown RBP25.03■■□□□ 1.6
NECAB3-213ENST00000488489 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
NECAB3-213ENST00000488489 CYP19A1P11511 503 aaPredicted RBP25.03■■□□□ 1.6
NECAB3-213ENST00000488489 GSPT1P15170 499 aaKnown RBP25.03■■□□□ 1.6
NECAB3-213ENST00000488489 HDAC5Q9UQL6 1122 aa25.03■■□□□ 1.6
NECAB3-213ENST00000488489 JARID2Q92833 1246 aaPredicted RBP25.03■■□□□ 1.6
NECAB3-213ENST00000488489 KCNQ2O43526 872 aa25.01■■□□□ 1.59
NECAB3-213ENST00000488489 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
NECAB3-213ENST00000488489 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.01■■□□□ 1.59
NECAB3-213ENST00000488489 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
NECAB3-213ENST00000488489 TTC22Q5TAA0 569 aa25■■□□□ 1.59
NECAB3-213ENST00000488489 SALL3Q9BXA9 1300 aa24.99■■□□□ 1.59
NECAB3-213ENST00000488489 TJP1Q07157 1748 aa24.99■■□□□ 1.59
NECAB3-213ENST00000488489 MEX3CQ5U5Q3 659 aaKnown RBP24.99■■□□□ 1.59
NECAB3-213ENST00000488489 A0A087WZG4 1122 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 UBE3BQ7Z3V4 1068 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 RAB11FIP3O75154 756 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 CASP7P55210 303 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 IL1RAPL2Q9NP60 686 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 ZBTB1Q9Y2K1 713 aa24.98■■□□□ 1.59
NECAB3-213ENST00000488489 PDE1AP54750 535 aa24.97■■□□□ 1.59
NECAB3-213ENST00000488489 PA2G4Q9UQ80 394 aaKnown RBP24.97■■□□□ 1.59
NECAB3-213ENST00000488489 RHPN1Q8TCX5 695 aa24.97■■□□□ 1.59
NECAB3-213ENST00000488489 OSBPL3Q9H4L5 887 aa24.97■■□□□ 1.59
NECAB3-213ENST00000488489 AFF2P51816 1311 aa24.95■■□□□ 1.59
NECAB3-213ENST00000488489 TSHZ3Q63HK5 1081 aa24.95■■□□□ 1.58
NECAB3-213ENST00000488489 LOC102724428A0A0B4J2F2 783 aa24.94■■□□□ 1.58
NECAB3-213ENST00000488489 H7C1W4 665 aa24.94■■□□□ 1.58
NECAB3-213ENST00000488489 SIK1P57059 783 aa24.94■■□□□ 1.58
NECAB3-213ENST00000488489 CWC25Q9NXE8 425 aaPredicted RBP24.94■■□□□ 1.58
NECAB3-213ENST00000488489 KIF1BPQ96EK5 621 aa24.94■■□□□ 1.58
NECAB3-213ENST00000488489 GJD4Q96KN9 370 aaPredicted RBP24.94■■□□□ 1.58
NECAB3-213ENST00000488489 THSD7AQ9UPZ6 1657 aa24.93■■□□□ 1.58
NECAB3-213ENST00000488489 ATP6V1AP38606 617 aa24.93■■□□□ 1.58
NECAB3-213ENST00000488489 TBC1D9Q6ZT07 1266 aa24.93■■□□□ 1.58
NECAB3-213ENST00000488489 CCDC191Q8NCU4 936 aa24.93■■□□□ 1.58
NECAB3-213ENST00000488489 COL15A1P39059 1388 aa24.93■■□□□ 1.58
NECAB3-213ENST00000488489 MX1P20591 662 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 TCIRG1Q13488 830 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 HSP90AB4PQ58FF6 505 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 KIF6Q6ZMV9 814 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 PTF1AQ7RTS3 328 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 ARXQ96QS3 562 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 ISCA1Q9BUE6 129 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 PALLDQ8WX93 1383 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 MFAP1P55081 439 aaKnown RBP24.92■■□□□ 1.58
NECAB3-213ENST00000488489 ITPK1Q13572 414 aa24.92■■□□□ 1.58
NECAB3-213ENST00000488489 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
NECAB3-213ENST00000488489 SDSP20132 328 aa24.91■■□□□ 1.58
NECAB3-213ENST00000488489 RABL6Q3YEC7 729 aaPredicted RBP24.91■■□□□ 1.58
NECAB3-213ENST00000488489 TBC1D32Q96NH3 1257 aa24.91■■□□□ 1.58
NECAB3-213ENST00000488489 NUTM1Q86Y26 1132 aa24.91■■□□□ 1.58
NECAB3-213ENST00000488489 KLHDC4Q8TBB5 520 aa24.91■■□□□ 1.58
NECAB3-213ENST00000488489 UPF2Q9HAU5 1272 aaKnown RBP24.91■■□□□ 1.58
NECAB3-213ENST00000488489 OS9Q13438 667 aaPredicted RBP24.9■■□□□ 1.58
NECAB3-213ENST00000488489 HLFQ16534 295 aa24.9■■□□□ 1.58
NECAB3-213ENST00000488489 FAM182BQ5T319 152 aa24.9■■□□□ 1.58
NECAB3-213ENST00000488489 INTS5Q6P9B9 1019 aaKnown RBP24.9■■□□□ 1.58
NECAB3-213ENST00000488489 STAP2Q9UGK3 403 aa24.9■■□□□ 1.58
NECAB3-213ENST00000488489 IL6STP40189 918 aaPredicted RBP24.89■■□□□ 1.58
NECAB3-213ENST00000488489 CDC45O75419 566 aa24.88■■□□□ 1.57
NECAB3-213ENST00000488489 FOXO4P98177 505 aa24.88■■□□□ 1.57
NECAB3-213ENST00000488489 GIGYF2Q6Y7W6 1299 aaKnown RBP24.88■■□□□ 1.57
NECAB3-213ENST00000488489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.88■■□□□ 1.57
NECAB3-213ENST00000488489 CRKLP46109 303 aaKnown RBP24.88■■□□□ 1.57
NECAB3-213ENST00000488489 RFX5P48382 616 aaPredicted RBP24.88■■□□□ 1.57
NECAB3-213ENST00000488489 TRIM28Q13263 835 aaKnown RBP24.88■■□□□ 1.57
NECAB3-213ENST00000488489 MYH14Q7Z406 1995 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms