RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-213ENST00000462730 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
HDAC6-213ENST00000462730 AFF2P51816 1311 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 A0A0G2JS52 829 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 A1BGP04217 495 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
HDAC6-213ENST00000462730 TJP1Q07157 1748 aa17.93■□□□□ 0.46
HDAC6-213ENST00000462730 NUP188Q5SRE5 1749 aa17.92■□□□□ 0.46
HDAC6-213ENST00000462730 MFAP1P55081 439 aaKnown RBP17.92■□□□□ 0.46
HDAC6-213ENST00000462730 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
HDAC6-213ENST00000462730 C9orf78Q9NZ63 289 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-213ENST00000462730 IBTKQ9P2D0 1353 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-213ENST00000462730 ANKRD13DQ6ZTN6 518 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 SSH3Q8TE77 659 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 TBC1D32Q96NH3 1257 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
HDAC6-213ENST00000462730 POLA2Q14181 598 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 TTC22Q5TAA0 569 aa17.91■□□□□ 0.46
HDAC6-213ENST00000462730 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
HDAC6-213ENST00000462730 SLC4A9Q96Q91 983 aa17.9■□□□□ 0.46
HDAC6-213ENST00000462730 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-213ENST00000462730 LRRCC1Q9C099 1032 aa17.9■□□□□ 0.46
HDAC6-213ENST00000462730 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
HDAC6-213ENST00000462730 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-213ENST00000462730 SRGAP3O43295 1099 aa17.89■□□□□ 0.45
HDAC6-213ENST00000462730 ATRNO75882 1429 aa17.89■□□□□ 0.45
HDAC6-213ENST00000462730 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
HDAC6-213ENST00000462730 MYD88Q99836 296 aa17.89■□□□□ 0.45
HDAC6-213ENST00000462730 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-213ENST00000462730 GRM8O00222 908 aa17.88■□□□□ 0.45
HDAC6-213ENST00000462730 STARD3NLO95772 234 aa17.88■□□□□ 0.45
HDAC6-213ENST00000462730 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
HDAC6-213ENST00000462730 HDAC5Q9UQL6 1122 aa17.88■□□□□ 0.45
HDAC6-213ENST00000462730 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
HDAC6-213ENST00000462730 CDC45O75419 566 aa17.87■□□□□ 0.45
HDAC6-213ENST00000462730 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
HDAC6-213ENST00000462730 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
HDAC6-213ENST00000462730 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-213ENST00000462730 UTYO14607 1347 aa17.87■□□□□ 0.45
HDAC6-213ENST00000462730 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-213ENST00000462730 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
HDAC6-213ENST00000462730 C22orf23Q9BZE7 217 aa17.86■□□□□ 0.45
HDAC6-213ENST00000462730 KCNQ2O43526 872 aa17.86■□□□□ 0.45
HDAC6-213ENST00000462730 RAB11FIP3O75154 756 aa17.86■□□□□ 0.45
HDAC6-213ENST00000462730 SLC4A3P48751 1232 aa17.85■□□□□ 0.45
HDAC6-213ENST00000462730 PDE1AP54750 535 aa17.85■□□□□ 0.45
HDAC6-213ENST00000462730 MTX1Q13505 466 aa17.85■□□□□ 0.45
HDAC6-213ENST00000462730 SUCLG2Q96I99 432 aa17.85■□□□□ 0.45
HDAC6-213ENST00000462730 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-213ENST00000462730 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-213ENST00000462730 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 CYP19A1P11511 503 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-213ENST00000462730 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 NHSQ6T4R5 1651 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 GCKRQ14397 625 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
HDAC6-213ENST00000462730 ATP5J2-PTCD1G3V325 749 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 SDSP20132 328 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 LOC102724428A0A0B4J2F2 783 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 MX1P20591 662 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 SIK1P57059 783 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 RHPN1Q8TCX5 695 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 KAZALD1Q96I82 304 aa17.82■□□□□ 0.44
HDAC6-213ENST00000462730 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
HDAC6-213ENST00000462730 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
HDAC6-213ENST00000462730 TSHZ3Q63HK5 1081 aa17.81■□□□□ 0.44
HDAC6-213ENST00000462730 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
HDAC6-213ENST00000462730 BTAF1O14981 1849 aa17.81■□□□□ 0.44
HDAC6-213ENST00000462730 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-213ENST00000462730 RREB1Q92766 1687 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 COL5A3P25940 1745 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-213ENST00000462730 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 BECN1Q14457 450 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 FAM182BQ5T319 152 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
HDAC6-213ENST00000462730 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-213ENST00000462730 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-213ENST00000462730 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
HDAC6-213ENST00000462730 QTRT2Q9H974 415 aaKnown RBP17.79■□□□□ 0.44
HDAC6-213ENST00000462730 PA2G4Q9UQ80 394 aaKnown RBP17.79■□□□□ 0.44
HDAC6-213ENST00000462730 AOX1Q06278 1338 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 ITPK1Q13572 414 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 SBF2Q86WG5 1849 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 SEPT12Q8IYM1 358 aa17.78■□□□□ 0.44
HDAC6-213ENST00000462730 A0A087WZG4 1122 aa17.77■□□□□ 0.44
HDAC6-213ENST00000462730 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
HDAC6-213ENST00000462730 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.44
HDAC6-213ENST00000462730 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
HDAC6-213ENST00000462730 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
HDAC6-213ENST00000462730 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms