RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
CHRNA7-202ENST00000437966 NEURL1BA8MQ27 555 aa24.37■■□□□ 1.49
CHRNA7-202ENST00000437966 HMMRO75330 724 aa24.37■■□□□ 1.49
CHRNA7-202ENST00000437966 PTF1AQ7RTS3 328 aa24.37■■□□□ 1.49
CHRNA7-202ENST00000437966 ZBTB3Q9H5J0 574 aa24.37■■□□□ 1.49
CHRNA7-202ENST00000437966 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
CHRNA7-202ENST00000437966 CYP19A1P11511 503 aaPredicted RBP24.36■■□□□ 1.49
CHRNA7-202ENST00000437966 TRPC5Q9UL62 973 aaPredicted RBP24.35■■□□□ 1.49
CHRNA7-202ENST00000437966 GRM8O00222 908 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 PPP1R42Q7Z4L9 355 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 ARXQ96QS3 562 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 QTRT2Q9H974 415 aaKnown RBP24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 FAM161AQ3B820 660 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 C8orf34Q49A92 452 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 EXOC6BQ9Y2D4 811 aa24.34■■□□□ 1.49
CHRNA7-202ENST00000437966 ATRNO75882 1429 aa24.33■■□□□ 1.49
CHRNA7-202ENST00000437966 GCKRQ14397 625 aa24.33■■□□□ 1.49
CHRNA7-202ENST00000437966 SUCLG2Q96I99 432 aa24.33■■□□□ 1.49
CHRNA7-202ENST00000437966 ATP6V1AP38606 617 aa24.32■■□□□ 1.48
CHRNA7-202ENST00000437966 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
CHRNA7-202ENST00000437966 THSD7AQ9UPZ6 1657 aa24.31■■□□□ 1.48
CHRNA7-202ENST00000437966 SRGAP3O43295 1099 aa24.31■■□□□ 1.48
CHRNA7-202ENST00000437966 SEPT12Q8IYM1 358 aa24.31■■□□□ 1.48
CHRNA7-202ENST00000437966 ARFGEF2Q9Y6D5 1785 aa24.3■■□□□ 1.48
CHRNA7-202ENST00000437966 LOC102724428A0A0B4J2F2 783 aa24.3■■□□□ 1.48
CHRNA7-202ENST00000437966 SIK1P57059 783 aa24.3■■□□□ 1.48
CHRNA7-202ENST00000437966 KAZALD1Q96I82 304 aa24.3■■□□□ 1.48
CHRNA7-202ENST00000437966 ITPK1Q13572 414 aa24.29■■□□□ 1.48
CHRNA7-202ENST00000437966 SSH3Q8TE77 659 aa24.29■■□□□ 1.48
CHRNA7-202ENST00000437966 PALLDQ8WX93 1383 aa24.29■■□□□ 1.48
CHRNA7-202ENST00000437966 UTYO14607 1347 aa24.29■■□□□ 1.48
CHRNA7-202ENST00000437966 TJP1Q07157 1748 aa24.28■■□□□ 1.48
CHRNA7-202ENST00000437966 POLA2Q14181 598 aa24.28■■□□□ 1.48
CHRNA7-202ENST00000437966 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
CHRNA7-202ENST00000437966 ZBTB47Q9UFB7 747 aaPredicted RBP24.28■■□□□ 1.48
CHRNA7-202ENST00000437966 ONECUT3O60422 494 aaPredicted RBP24.27■■□□□ 1.48
CHRNA7-202ENST00000437966 KCNQ4P56696 695 aa24.27■■□□□ 1.48
CHRNA7-202ENST00000437966 BICC1Q9H694 974 aaKnown RBP24.27■■□□□ 1.48
CHRNA7-202ENST00000437966 A0A087WZG4 1122 aa24.26■■□□□ 1.47
CHRNA7-202ENST00000437966 RTL5Q5HYW3 569 aaPredicted RBP24.26■■□□□ 1.47
CHRNA7-202ENST00000437966 EPHA10Q5JZY3 1008 aa24.26■■□□□ 1.47
CHRNA7-202ENST00000437966 KIF6Q6ZMV9 814 aa24.26■■□□□ 1.47
CHRNA7-202ENST00000437966 SMARCC1Q92922 1105 aaPredicted RBP24.26■■□□□ 1.47
CHRNA7-202ENST00000437966 INTS5Q6P9B9 1019 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-202ENST00000437966 UBE3BQ7Z3V4 1068 aa24.25■■□□□ 1.47
CHRNA7-202ENST00000437966 SURF6O75683 361 aaKnown RBP24.24■■□□□ 1.47
CHRNA7-202ENST00000437966 HLFQ16534 295 aa24.24■■□□□ 1.47
CHRNA7-202ENST00000437966 NUP188Q5SRE5 1749 aa24.24■■□□□ 1.47
CHRNA7-202ENST00000437966 CRKLP46109 303 aaKnown RBP24.24■■□□□ 1.47
CHRNA7-202ENST00000437966 PLEKHM2Q8IWE5 1019 aa24.24■■□□□ 1.47
CHRNA7-202ENST00000437966 AFDNP55196 1824 aaKnown RBP24.23■■□□□ 1.47
CHRNA7-202ENST00000437966 CCDC87Q9NVE4 849 aa24.23■■□□□ 1.47
CHRNA7-202ENST00000437966 CWC25Q9NXE8 425 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-202ENST00000437966 TBC1D2BQ9UPU7 963 aa24.23■■□□□ 1.47
CHRNA7-202ENST00000437966 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
CHRNA7-202ENST00000437966 PA2G4Q9UQ80 394 aaKnown RBP24.22■■□□□ 1.47
CHRNA7-202ENST00000437966 HDAC5Q9UQL6 1122 aa24.22■■□□□ 1.47
CHRNA7-202ENST00000437966 IBTKQ9P2D0 1353 aaPredicted RBP24.22■■□□□ 1.47
CHRNA7-202ENST00000437966 TCIRG1Q13488 830 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 MTX1Q13505 466 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 LRRCC1Q9C099 1032 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 MAP3K15Q6ZN16 1313 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 SEC24BO95487 1268 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 CASP7P55210 303 aa24.21■■□□□ 1.47
CHRNA7-202ENST00000437966 H7C1W4 665 aa24.2■■□□□ 1.46
CHRNA7-202ENST00000437966 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.46
CHRNA7-202ENST00000437966 ISCA1Q9BUE6 129 aa24.2■■□□□ 1.46
CHRNA7-202ENST00000437966 IL1RAPL2Q9NP60 686 aa24.19■■□□□ 1.46
CHRNA7-202ENST00000437966 DZIP3Q86Y13 1208 aaKnown RBP24.19■■□□□ 1.46
CHRNA7-202ENST00000437966 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
CHRNA7-202ENST00000437966 LINC00116Q8NCU8 138 aa24.19■■□□□ 1.46
CHRNA7-202ENST00000437966 GPTP24298 496 aa24.18■■□□□ 1.46
CHRNA7-202ENST00000437966 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
CHRNA7-202ENST00000437966 GIGYF2Q6Y7W6 1299 aaKnown RBP24.17■■□□□ 1.46
CHRNA7-202ENST00000437966 KLHDC4Q8TBB5 520 aa24.17■■□□□ 1.46
CHRNA7-202ENST00000437966 RAB11FIP3O75154 756 aa24.16■■□□□ 1.46
CHRNA7-202ENST00000437966 OS9Q13438 667 aaPredicted RBP24.16■■□□□ 1.46
CHRNA7-202ENST00000437966 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
CHRNA7-202ENST00000437966 RHPN1Q8TCX5 695 aa24.16■■□□□ 1.46
CHRNA7-202ENST00000437966 TSHZ3Q63HK5 1081 aa24.15■■□□□ 1.46
CHRNA7-202ENST00000437966 GSPT1P15170 499 aaKnown RBP24.14■■□□□ 1.46
CHRNA7-202ENST00000437966 FOXO4P98177 505 aa24.14■■□□□ 1.46
CHRNA7-202ENST00000437966 NOP58Q9Y2X3 529 aaKnown RBP24.14■■□□□ 1.46
CHRNA7-202ENST00000437966 BTAF1O14981 1849 aa24.14■■□□□ 1.45
CHRNA7-202ENST00000437966 SIL1Q9H173 461 aa24.14■■□□□ 1.45
CHRNA7-202ENST00000437966 NHSQ6T4R5 1651 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 BMP2KLQ5H9B9 411 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 LMBR1LQ6UX01 489 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 NUTM1Q86Y26 1132 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 FAM89AQ96GI7 184 aa24.13■■□□□ 1.45
CHRNA7-202ENST00000437966 MYH14Q7Z406 1995 aaKnown RBP24.12■■□□□ 1.45
CHRNA7-202ENST00000437966 TTC22Q5TAA0 569 aa24.12■■□□□ 1.45
CHRNA7-202ENST00000437966 CHMP3Q9Y3E7 222 aa24.12■■□□□ 1.45
CHRNA7-202ENST00000437966 TRIM28Q13263 835 aaKnown RBP24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 NLRP10Q86W26 655 aa24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 ERVV-1B6SEH8 477 aa24.11■■□□□ 1.45
CHRNA7-202ENST00000437966 PDE1AP54750 535 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms