RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-202ENST00000421230 COPS6Q7L5N1 327 aa22.53■■□□□ 1.2
PPFIA3-202ENST00000421230 CHMP5Q9NZZ3 219 aa22.52■■□□□ 1.2
PPFIA3-202ENST00000421230 DNAAF4Q8WXU2 420 aa22.51■■□□□ 1.19
PPFIA3-202ENST00000421230 MAP3K2Q9Y2U5 619 aa22.51■■□□□ 1.19
PPFIA3-202ENST00000421230 C22orf23Q9BZE7 217 aa22.5■■□□□ 1.19
PPFIA3-202ENST00000421230 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
PPFIA3-202ENST00000421230 MEIS3Q99687 375 aa22.5■■□□□ 1.19
PPFIA3-202ENST00000421230 TEX13AQ9BXU3 409 aaPredicted RBP22.5■■□□□ 1.19
PPFIA3-202ENST00000421230 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
PPFIA3-202ENST00000421230 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
PPFIA3-202ENST00000421230 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
PPFIA3-202ENST00000421230 ERBB4Q15303 1308 aa22.49■■□□□ 1.19
PPFIA3-202ENST00000421230 CHMP4BQ9H444 224 aaKnown RBP22.49■■□□□ 1.19
PPFIA3-202ENST00000421230 STARD3NLO95772 234 aa22.48■■□□□ 1.19
PPFIA3-202ENST00000421230 DDX58O95786 925 aaKnown RBP22.48■■□□□ 1.19
PPFIA3-202ENST00000421230 RIC3Q7Z5B4 369 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 TJP1Q07157 1748 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 CYP19A1P11511 503 aaPredicted RBP22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 SIK1P57059 783 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 HDAC1Q13547 482 aaPredicted RBP22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 BEND3Q5T5X7 828 aa22.47■■□□□ 1.19
PPFIA3-202ENST00000421230 TRAK2O60296 914 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 SPRYD3Q8NCJ5 442 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 ZNF330Q9Y3S2 320 aaPredicted RBP22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 N4BP2Q86UW6 1770 aaPredicted RBP22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 NHSQ6T4R5 1651 aa22.46■■□□□ 1.19
PPFIA3-202ENST00000421230 TTLL7Q6ZT98 887 aa22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 ANKRD13DQ6ZTN6 518 aa22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 SMARCC1Q92922 1105 aaPredicted RBP22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 SBF2Q86WG5 1849 aa22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 BTAF1O14981 1849 aa22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 CLCN1P35523 988 aa22.45■■□□□ 1.18
PPFIA3-202ENST00000421230 PANK2Q9BZ23 570 aa22.44■■□□□ 1.18
PPFIA3-202ENST00000421230 MFAP1P55081 439 aaKnown RBP22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 ITPK1Q13572 414 aa22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 MRE11P49959 708 aa22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 KCNQ4P56696 695 aa22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 CWF19L2Q2TBE0 894 aaKnown RBP22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 USP44Q9H0E7 712 aa22.43■■□□□ 1.18
PPFIA3-202ENST00000421230 RXRBP28702 533 aa22.42■■□□□ 1.18
PPFIA3-202ENST00000421230 GZF1Q9H116 711 aaPredicted RBP22.42■■□□□ 1.18
PPFIA3-202ENST00000421230 ZBTB1Q9Y2K1 713 aa22.42■■□□□ 1.18
PPFIA3-202ENST00000421230 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
PPFIA3-202ENST00000421230 DDIT3P35638 169 aa22.42■■□□□ 1.18
PPFIA3-202ENST00000421230 SMC5Q8IY18 1101 aa22.41■■□□□ 1.18
PPFIA3-202ENST00000421230 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
PPFIA3-202ENST00000421230 MYD88Q99836 296 aa22.41■■□□□ 1.18
PPFIA3-202ENST00000421230 PLBD2Q8NHP8 589 aa22.4■■□□□ 1.18
PPFIA3-202ENST00000421230 ARFGEF2Q9Y6D5 1785 aa22.4■■□□□ 1.18
PPFIA3-202ENST00000421230 DDX11L8A8MPP1 907 aa22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 POTEAQ6S8J7 498 aa22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 ARXQ96QS3 562 aa22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 ZBTB3Q9H5J0 574 aa22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.18
PPFIA3-202ENST00000421230 IGKV5-2P06315 115 aa22.39■■□□□ 1.17
PPFIA3-202ENST00000421230 FAM196AQ6ZSG2 479 aa22.39■■□□□ 1.17
PPFIA3-202ENST00000421230 LINS1Q8NG48 757 aa22.39■■□□□ 1.17
PPFIA3-202ENST00000421230 GNAI3P08754 354 aa22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 NBPF7P0C2Y1 421 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 HSCBQ8IWL3 235 aa22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 GNAI2P04899 355 aa22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 CRKLP46109 303 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 NEXNQ0ZGT2 675 aa22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-202ENST00000421230 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 UBTFL1P0CB47 393 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 RBM25P49756 843 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 SNX21Q969T3 373 aa22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 BCL11BQ9C0K0 894 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 ATP5J2-PTCD1G3V325 749 aa22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 CEP85Q6P2H3 762 aa22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
PPFIA3-202ENST00000421230 LRRFIP2Q9Y608 721 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-202ENST00000421230 MYH14Q7Z406 1995 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-202ENST00000421230 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 TRIM37O94972 964 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 LINC00116Q8NCU8 138 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 C9orf78Q9NZ63 289 aaPredicted RBP22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 NUP188Q5SRE5 1749 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 GRPEL1Q9HAV7 217 aa22.35■■□□□ 1.17
PPFIA3-202ENST00000421230 CICQ96RK0 1608 aaPredicted RBP22.34■■□□□ 1.17
PPFIA3-202ENST00000421230 KIF6Q6ZMV9 814 aa22.34■■□□□ 1.17
PPFIA3-202ENST00000421230 COL5A3P25940 1745 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-202ENST00000421230 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-202ENST00000421230 RPAP2Q8IXW5 612 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-202ENST00000421230 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.16
PPFIA3-202ENST00000421230 AFDNP55196 1824 aaKnown RBP22.32■■□□□ 1.16
PPFIA3-202ENST00000421230 ZNF831Q5JPB2 1677 aa22.32■■□□□ 1.16
PPFIA3-202ENST00000421230 GCKRQ14397 625 aa22.32■■□□□ 1.16
PPFIA3-202ENST00000421230 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
PPFIA3-202ENST00000421230 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms