RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 K7ELQ4 463 aaPredicted RBP14.4□□□□□ -0.1
COL25A1-202ENST00000399127 RAB11FIP3O75154 756 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 REC8O95072 547 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 HSP90AA2PQ14568 343 aaPredicted RBP14.4□□□□□ -0.1
COL25A1-202ENST00000399127 LINS1Q8NG48 757 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 GRM8O00222 908 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 IGKV5-2P06315 115 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 JARID2Q92833 1246 aaPredicted RBP14.4□□□□□ -0.1
COL25A1-202ENST00000399127 KIF1BPQ96EK5 621 aa14.4□□□□□ -0.1
COL25A1-202ENST00000399127 SNRPA1P09661 255 aaKnown RBP14.39□□□□□ -0.11
COL25A1-202ENST00000399127 SUCLG2Q96I99 432 aa14.39□□□□□ -0.11
COL25A1-202ENST00000399127 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
COL25A1-202ENST00000399127 FMNL2Q96PY5 1086 aa14.39□□□□□ -0.11
COL25A1-202ENST00000399127 MYD88Q99836 296 aa14.39□□□□□ -0.11
COL25A1-202ENST00000399127 BICC1Q9H694 974 aaKnown RBP14.39□□□□□ -0.11
COL25A1-202ENST00000399127 CHMLP26374 656 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 RABEP1Q15276 862 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 ESYT1Q9BSJ8 1104 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 PCDH11YQ9BZA8 1340 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 TUBGCP6Q96RT7 1819 aa14.38□□□□□ -0.11
COL25A1-202ENST00000399127 RRP9O43818 475 aaKnown RBP14.37□□□□□ -0.11
COL25A1-202ENST00000399127 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 DDIT3P35638 169 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 NEXNQ0ZGT2 675 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 MTX1Q13505 466 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 IL25Q9H293 177 aa14.37□□□□□ -0.11
COL25A1-202ENST00000399127 ANKRD13DQ6ZTN6 518 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 SIL1Q9H173 461 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 MRC1P22897 1456 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 NEURL1BA8MQ27 555 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 PTCD1O75127 700 aaKnown RBP14.36□□□□□ -0.11
COL25A1-202ENST00000399127 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
COL25A1-202ENST00000399127 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
COL25A1-202ENST00000399127 ATP5J2-PTCD1G3V325 749 aa14.35□□□□□ -0.11
COL25A1-202ENST00000399127 MCM4P33991 863 aa14.35□□□□□ -0.11
COL25A1-202ENST00000399127 HSP90AB4PQ58FF6 505 aa14.35□□□□□ -0.11
COL25A1-202ENST00000399127 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
COL25A1-202ENST00000399127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
COL25A1-202ENST00000399127 GCKRQ14397 625 aa14.35□□□□□ -0.11
COL25A1-202ENST00000399127 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
COL25A1-202ENST00000399127 EPHA10Q5JZY3 1008 aa14.34□□□□□ -0.11
COL25A1-202ENST00000399127 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
COL25A1-202ENST00000399127 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
COL25A1-202ENST00000399127 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.11
COL25A1-202ENST00000399127 AOX1Q06278 1338 aa14.33□□□□□ -0.11
COL25A1-202ENST00000399127 PARP4Q9UKK3 1724 aaKnown RBP14.33□□□□□ -0.12
COL25A1-202ENST00000399127 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.12
COL25A1-202ENST00000399127 COL22A1Q8NFW1 1626 aaPredicted RBP14.33□□□□□ -0.12
COL25A1-202ENST00000399127 UTYO14607 1347 aa14.33□□□□□ -0.12
COL25A1-202ENST00000399127 AACSQ86V21 672 aa14.33□□□□□ -0.12
COL25A1-202ENST00000399127 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
COL25A1-202ENST00000399127 NBPF26B4DH59 902 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 NBPF10Q6P3W6 841 aaKnown RBP14.32□□□□□ -0.12
COL25A1-202ENST00000399127 UBE3BQ7Z3V4 1068 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 NBPF15Q8N660 670 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 ST18O60284 1047 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 SASH1O94885 1247 aa14.32□□□□□ -0.12
COL25A1-202ENST00000399127 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
COL25A1-202ENST00000399127 PLEKHG2Q9H7P9 1386 aa14.31□□□□□ -0.12
COL25A1-202ENST00000399127 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
COL25A1-202ENST00000399127 A1BGP04217 495 aa14.31□□□□□ -0.12
COL25A1-202ENST00000399127 NEK4P51957 841 aa14.31□□□□□ -0.12
COL25A1-202ENST00000399127 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL25A1-202ENST00000399127 CCDC8Q9H0W5 538 aaPredicted RBP14.31□□□□□ -0.12
COL25A1-202ENST00000399127 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
COL25A1-202ENST00000399127 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
COL25A1-202ENST00000399127 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
COL25A1-202ENST00000399127 GLI3P10071 1580 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
COL25A1-202ENST00000399127 CWC27Q6UX04 472 aaKnown RBP14.3□□□□□ -0.12
COL25A1-202ENST00000399127 TTLL7Q6ZT98 887 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 EAF2Q96CJ1 260 aaPredicted RBP14.3□□□□□ -0.12
COL25A1-202ENST00000399127 TLR7Q9NYK1 1049 aaKnown RBP14.3□□□□□ -0.12
COL25A1-202ENST00000399127 A0A087WZG4 1122 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 A0A0G2JS52 829 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 ERVV-2B6SEH9 535 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 EXOC5O00471 708 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 SSFA2P28290 1259 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 ERC1Q8IUD2 1116 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 ECHDC1Q9NTX5 307 aa14.3□□□□□ -0.12
COL25A1-202ENST00000399127 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
COL25A1-202ENST00000399127 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
COL25A1-202ENST00000399127 MCCP23508 829 aa14.29□□□□□ -0.12
COL25A1-202ENST00000399127 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
COL25A1-202ENST00000399127 NGLY1Q96IV0 654 aa14.29□□□□□ -0.12
COL25A1-202ENST00000399127 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
COL25A1-202ENST00000399127 TTC41PQ6P2S7 1318 aa14.29□□□□□ -0.12
COL25A1-202ENST00000399127 ZGPATQ8N5A5 531 aaKnown RBP14.29□□□□□ -0.12
COL25A1-202ENST00000399127 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
COL25A1-202ENST00000399127 ARXQ96QS3 562 aa14.28□□□□□ -0.12
COL25A1-202ENST00000399127 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms