RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 ZKSCAN8Q15776 578 aaPredicted RBP12.49□□□□□ -0.41
HIPK1-203ENST00000369553 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
HIPK1-203ENST00000369553 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
HIPK1-203ENST00000369553 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 CTIFO43310 598 aaKnown RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 ZNF445P59923 1031 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 MNS1Q8NEH6 495 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 HOXC9P31274 260 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 DCCP43146 1447 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 NAA30Q147X3 362 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
HIPK1-203ENST00000369553 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
HIPK1-203ENST00000369553 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
HIPK1-203ENST00000369553 MAFGO15525 162 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 IL16Q14005 1332 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 DEF6Q9H4E7 631 aa12.47□□□□□ -0.41
HIPK1-203ENST00000369553 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
HIPK1-203ENST00000369553 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.41
HIPK1-203ENST00000369553 ITFG2Q969R8 447 aa12.46□□□□□ -0.41
HIPK1-203ENST00000369553 EYA1Q99502 592 aa12.46□□□□□ -0.41
HIPK1-203ENST00000369553 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 RARSP54136 660 aaKnown RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 SLIT3O75094 1523 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 REC8O95072 547 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 GSCP56915 257 aaPredicted RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 ARMCX6Q7L4S7 300 aa12.45□□□□□ -0.42
HIPK1-203ENST00000369553 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
HIPK1-203ENST00000369553 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 DDIT3P35638 169 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 MSH6P52701 1360 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 HSCBQ8IWL3 235 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
HIPK1-203ENST00000369553 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 INHBEP58166 350 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 TTC19Q6DKK2 380 aaPredicted RBP12.44□□□□□ -0.42
HIPK1-203ENST00000369553 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
HIPK1-203ENST00000369553 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
HIPK1-203ENST00000369553 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.44□□□□□ -0.42
HIPK1-203ENST00000369553 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 KDRP35968 1356 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 IP6K1Q92551 441 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 TTC31Q49AM3 519 aaPredicted RBP12.43□□□□□ -0.42
HIPK1-203ENST00000369553 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
HIPK1-203ENST00000369553 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
HIPK1-203ENST00000369553 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
HIPK1-203ENST00000369553 A0A1B0GUL7 405 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 GCP02774 474 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 CCDC96Q2M329 555 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
HIPK1-203ENST00000369553 MAP2K2P36507 400 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
HIPK1-203ENST00000369553 RAD50Q92878 1312 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 H0YHG0 523 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
HIPK1-203ENST00000369553 BMS1Q14692 1282 aaKnown RBP12.41□□□□□ -0.42
HIPK1-203ENST00000369553 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 MUM1L1Q5H9M0 696 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
HIPK1-203ENST00000369553 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
HIPK1-203ENST00000369553 SSFA2P28290 1259 aa12.4□□□□□ -0.42
HIPK1-203ENST00000369553 MTHFSDQ2M296 383 aaKnown RBP12.4□□□□□ -0.42
HIPK1-203ENST00000369553 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
HIPK1-203ENST00000369553 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
HIPK1-203ENST00000369553 ANKRD20A12PQ8NF67 263 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms