RNA–Protein interactions for RNA: ENST00000368358.3

HCN3-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN3, Length 3,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-201ENST00000368358 NBPF14Q5TI25 921 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
HCN3-201ENST00000368358 NBPF15Q8N660 670 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 FOXD4L5Q5VV16 416 aaPredicted RBP16.31■□□□□ 0.2
HCN3-201ENST00000368358 FOXD4L4Q8WXT5 416 aaPredicted RBP16.31■□□□□ 0.2
HCN3-201ENST00000368358 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 ADCY9O60503 1353 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 MX1P20591 662 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
HCN3-201ENST00000368358 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
HCN3-201ENST00000368358 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 UNC5CLQ8IV45 518 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 OVOS2A0A0G2JMS6 1433 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 GCKRQ14397 625 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 PDIA6Q15084 440 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
HCN3-201ENST00000368358 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
HCN3-201ENST00000368358 PDE1AP54750 535 aa16.29■□□□□ 0.2
HCN3-201ENST00000368358 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
HCN3-201ENST00000368358 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
HCN3-201ENST00000368358 KCNJ4P48050 445 aa16.29■□□□□ 0.2
HCN3-201ENST00000368358 MARCH10Q8NA82 808 aaPredicted RBP16.28■□□□□ 0.2
HCN3-201ENST00000368358 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
HCN3-201ENST00000368358 PHF14O94880 888 aa16.28■□□□□ 0.2
HCN3-201ENST00000368358 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
HCN3-201ENST00000368358 RGS12O14924 1447 aa16.28■□□□□ 0.2
HCN3-201ENST00000368358 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
HCN3-201ENST00000368358 PLBD2Q8NHP8 589 aa16.28■□□□□ 0.2
HCN3-201ENST00000368358 SPATA31A1Q5TZJ5 1347 aa16.27■□□□□ 0.2
HCN3-201ENST00000368358 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.19
HCN3-201ENST00000368358 GPATCH3Q96I76 525 aa16.27■□□□□ 0.19
HCN3-201ENST00000368358 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.19
HCN3-201ENST00000368358 REC8O95072 547 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
HCN3-201ENST00000368358 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
HCN3-201ENST00000368358 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
HCN3-201ENST00000368358 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
HCN3-201ENST00000368358 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
HCN3-201ENST00000368358 NCLP19338 710 aaKnown RBP16.25■□□□□ 0.19
HCN3-201ENST00000368358 GSE1Q14687 1217 aa16.25■□□□□ 0.19
HCN3-201ENST00000368358 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
HCN3-201ENST00000368358 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
HCN3-201ENST00000368358 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
HCN3-201ENST00000368358 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
HCN3-201ENST00000368358 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
HCN3-201ENST00000368358 SIK1P57059 783 aa16.24■□□□□ 0.19
HCN3-201ENST00000368358 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
HCN3-201ENST00000368358 ERC2O15083 957 aa16.24■□□□□ 0.19
HCN3-201ENST00000368358 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
HCN3-201ENST00000368358 NDUFB9Q9Y6M9 179 aa16.24■□□□□ 0.19
HCN3-201ENST00000368358 AFF2P51816 1311 aa16.23■□□□□ 0.19
HCN3-201ENST00000368358 KIAA1211Q6ZU35 1233 aa16.23■□□□□ 0.19
HCN3-201ENST00000368358 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
HCN3-201ENST00000368358 NEK4P51957 841 aa16.23■□□□□ 0.19
HCN3-201ENST00000368358 HLFQ16534 295 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 CWC27Q6UX04 472 aaKnown RBP16.22■□□□□ 0.19
HCN3-201ENST00000368358 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 JCADQ9P266 1359 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
HCN3-201ENST00000368358 MCCP23508 829 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 QTRT2Q9H974 415 aaKnown RBP16.22■□□□□ 0.19
HCN3-201ENST00000368358 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
HCN3-201ENST00000368358 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
HCN3-201ENST00000368358 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
HCN3-201ENST00000368358 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
HCN3-201ENST00000368358 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
HCN3-201ENST00000368358 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
HCN3-201ENST00000368358 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
HCN3-201ENST00000368358 ST18O60284 1047 aa16.21■□□□□ 0.19
HCN3-201ENST00000368358 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
HCN3-201ENST00000368358 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
HCN3-201ENST00000368358 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
HCN3-201ENST00000368358 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
HCN3-201ENST00000368358 ERC1Q8IUD2 1116 aa16.2■□□□□ 0.18
HCN3-201ENST00000368358 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
HCN3-201ENST00000368358 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
HCN3-201ENST00000368358 K7ELQ4 463 aaPredicted RBP16.2■□□□□ 0.18
HCN3-201ENST00000368358 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
HCN3-201ENST00000368358 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
HCN3-201ENST00000368358 TFCP2Q12800 502 aa16.19■□□□□ 0.18
HCN3-201ENST00000368358 GNPATO15228 680 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 RBM25P49756 843 aaKnown RBP16.18■□□□□ 0.18
HCN3-201ENST00000368358 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
HCN3-201ENST00000368358 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 TIMM10P62072 90 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 SNRKQ9NRH2 765 aa16.18■□□□□ 0.18
HCN3-201ENST00000368358 IFIT5Q13325 482 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms