RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 MEIS3Q99687 375 aa13.3□□□□□ -0.28
POLR1B-202ENST00000333990 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
POLR1B-202ENST00000333990 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 WASF1Q92558 559 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
POLR1B-202ENST00000333990 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
POLR1B-202ENST00000333990 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
POLR1B-202ENST00000333990 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
POLR1B-202ENST00000333990 CHL1O00533 1208 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 SYNMO15061 1565 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
POLR1B-202ENST00000333990 MBD3O95983 291 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■■□□ 15.8
POLR1B-202ENST00000333990 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
POLR1B-202ENST00000333990 CCDC196A0A1B0GTZ2 297 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 ATP2B3Q16720 1220 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 SDF4Q9BRK5 362 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 ZFYP08048 801 aaPredicted RBP13.27□□□□□ -0.28
POLR1B-202ENST00000333990 IQCA1Q86XH1 822 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 STK32BQ9NY57 414 aa13.27□□□□□ -0.28
POLR1B-202ENST00000333990 WDR33Q9C0J8 1336 aaKnown RBP13.27□□□□□ -0.29
POLR1B-202ENST00000333990 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.29
POLR1B-202ENST00000333990 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
POLR1B-202ENST00000333990 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.29
POLR1B-202ENST00000333990 PLA2R1Q13018 1463 aa13.27□□□□□ -0.29
POLR1B-202ENST00000333990 GNPATO15228 680 aa13.27□□□□□ -0.29
POLR1B-202ENST00000333990 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
POLR1B-202ENST00000333990 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ATP2B1P20020 1258 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 STK38Q15208 465 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 GLIPR1L2Q4G1C9 344 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 GSTO1P78417 241 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 PLBD2Q8NHP8 589 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 USP6P35125 1406 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ZNF213O14771 459 aa13.26□□□□□ -0.29
POLR1B-202ENST00000333990 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ZNF444Q8N0Y2 327 aaPredicted RBP13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
POLR1B-202ENST00000333990 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
POLR1B-202ENST00000333990 UNC13BO14795 1591 aa13.25□□□□□ -0.29
POLR1B-202ENST00000333990 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
POLR1B-202ENST00000333990 GOLIM4O00461 696 aa13.25□□□□□ -0.29
POLR1B-202ENST00000333990 IPO7O95373 1038 aaKnown RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 TRPC5Q9UL62 973 aaPredicted RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 KINO60870 393 aaKnown RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
POLR1B-202ENST00000333990 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
POLR1B-202ENST00000333990 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-202ENST00000333990 STK3Q13188 491 aa13.24□□□□□ -0.29
POLR1B-202ENST00000333990 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
POLR1B-202ENST00000333990 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
POLR1B-202ENST00000333990 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
POLR1B-202ENST00000333990 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
POLR1B-202ENST00000333990 CASTP20810 708 aaKnown RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 PRPF40BQ6NWY9 871 aaKnown RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 KRT85P78386 507 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 R3HCC1Q9Y3T6 440 aaKnown RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 MYO1BO43795 1136 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 EYA3Q99504 573 aa13.23□□□□□ -0.29
POLR1B-202ENST00000333990 SH2B1Q9NRF2 756 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-202ENST00000333990 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 HLA-DOAP06340 250 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 BAG6P46379 1132 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
POLR1B-202ENST00000333990 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
POLR1B-202ENST00000333990 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
POLR1B-202ENST00000333990 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms