RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 ZFYVE9O95405 1425 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 ARHGAP45Q92619 1136 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 IL1RAPL2Q9NP60 686 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 PDE4BQ07343 736 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 SKIDA1Q1XH10 827 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 CACNA2D4Q7Z3S7 1137 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 UBXN4Q92575 508 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 CRACR2AQ9BSW2 395 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 SOS1Q07889 1333 aaPredicted RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 BAG3O95817 575 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 CWC25Q9NXE8 425 aaPredicted RBP8.35□□□□□ -1.07
CPS1-201ENST00000233072 FBXO3Q9UK99 471 aa8.35□□□□□ -1.07
CPS1-201ENST00000233072 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 PTPN14Q15678 1187 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 FEZ1Q99689 392 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 ZFYP08048 801 aaPredicted RBP8.34□□□□□ -1.07
CPS1-201ENST00000233072 IFNL2Q8IZJ0 200 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 ZSCAN16Q9H4T2 348 aaPredicted RBP8.34□□□□□ -1.07
CPS1-201ENST00000233072 HLA-DOAP06340 250 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 KIF18AQ8NI77 898 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 FERMT1Q9BQL6 677 aa8.34□□□□□ -1.07
CPS1-201ENST00000233072 TNRQ92752 1358 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 CFAP43Q8NDM7 1665 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 NLRP5P59047 1200 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 ST5P78524 1137 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 CCDC96Q2M329 555 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 HOOK3Q86VS8 718 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 KRT23Q9C075 422 aa8.34□□□□□ -1.08
CPS1-201ENST00000233072 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 TUBB4AP04350 444 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 C14orf93Q9H972 538 aaKnown RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 BMP2KLQ5H9B9 411 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 TAX1BP1Q86VP1 789 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 DYDC1Q8WWB3 177 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 URB2Q14146 1524 aaKnown RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 ANAPC15P60006 121 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 SMC1AQ14683 1233 aaKnown RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 LRRC45Q96CN5 670 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 ECHDC1Q9NTX5 307 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 LRRFIP2Q9Y608 721 aaKnown RBP8.33□□□□□ -1.08
CPS1-201ENST00000233072 SHANK2Q9UPX8 1470 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 MCM10Q7L590 875 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 ABCF2Q9UG63 623 aa8.33□□□□□ -1.08
CPS1-201ENST00000233072 POLR3GO15318 223 aaPredicted RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 PAFAH1B1P43034 410 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 USP37Q86T82 979 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 CNNM3Q8NE01 707 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 ERMNQ8TAM6 284 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 SCLT1Q96NL6 688 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 PUS7Q96PZ0 661 aaKnown RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 KAT14Q9H8E8 782 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 TCP11L1Q9NUJ3 509 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 CLIP2Q9UDT6 1046 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 TMTC2Q8N394 836 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 GIMAP7Q8NHV1 300 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 MAP2K1Q02750 393 aaPredicted RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 CABP5Q9NP86 173 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 EXOC6BQ9Y2D4 811 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 RTL9Q8NET4 1388 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 SYCE3A1L190 88 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 CCDC152Q4G0S7 254 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
CPS1-201ENST00000233072 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
CPS1-201ENST00000233072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPS1-201ENST00000233072 ESPNB1AK53 854 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 FLIIQ13045 1269 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 TTC22Q5TAA0 569 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 LUZP1Q86V48 1076 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 CENPHQ9H3R5 247 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 FAM193AP78312 1265 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 CKAP4Q07065 602 aaKnown RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 TRPM2O94759 1503 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 EXOC5O00471 708 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 SNRPA1P09661 255 aaKnown RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 PPP1R1BQ9UD71 204 aaPredicted RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 AMOTL2Q9Y2J4 779 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 ALDH1L1O75891 902 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms