RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 FAM153BP0C7A2 387 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 TSPAN8P19075 237 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 AGAP20933 346 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 ATP5F1P24539 256 aaPredicted RBP15.58■□□□□ 0.08
CLK3-210ENST00000563112 HSD17B3P37058 310 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 MAPK12P53778 367 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 TBL3Q12788 808 aaKnown RBP15.58■□□□□ 0.08
CLK3-210ENST00000563112 FAM153CQ494X1 144 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 CMPK2Q5EBM0 449 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 NDUFAF5Q5TEU4 345 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 ARHGAP11AQ6P4F7 1023 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 RPS27LQ71UM5 84 aaKnown RBP15.58■□□□□ 0.08
CLK3-210ENST00000563112 SLC22A9Q8IVM8 553 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 C9orf40Q8IXQ3 194 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 DND1Q8IYX4 353 aaKnown RBP15.58■□□□□ 0.08
CLK3-210ENST00000563112 OR52N2Q8NGI0 321 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 FAM57AQ8TBR7 257 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 ACMSDQ8TDX5 336 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 DOK4Q8TEW6 326 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 GAL3ST4Q96RP7 486 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 DEFB127Q9H1M4 99 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 CHST11Q9NPF2 352 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 STK38LQ9Y2H1 464 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 FAM166BA8MTA8 275 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 E9PLN8 166 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 G3V3Y1 287 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 HRKO00198 91 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 PPP6CO00743 305 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 PGRMC2O15173 223 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 ZNHIT1O43257 154 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 PDE9AO76083 593 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 OR4F21O95013 312 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 KRT6AP02538 564 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 KRT6BP04259 564 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 GSTA1P08263 222 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 HTR1EP28566 365 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 KRT6CP48668 564 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 XKP51811 444 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 ADORA2A-AS1P86434 159 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 RASA2Q15283 850 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 HLA-DQA1Q5Y7H0 255 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 SLC22A10Q63ZE4 541 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 LETMD1Q6P1Q0 360 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 CHERPQ8IWX8 916 aaKnown RBP15.57■□□□□ 0.08
CLK3-210ENST00000563112 GALNT12Q8IXK2 581 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 PHF10Q8WUB8 498 aaKnown RBP15.57■□□□□ 0.08
CLK3-210ENST00000563112 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 VKORC1Q9BQB6 163 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 TXLNGYQ9BZA5 131 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 IL1RL2Q9HB29 575 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 TEX10Q9NXF1 929 aaPredicted RBP15.57■□□□□ 0.08
CLK3-210ENST00000563112 TBK1Q9UHD2 729 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 DCDC2Q9UHG0 476 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 PSME2Q9UL46 239 aa15.57■□□□□ 0.08
CLK3-210ENST00000563112 CREBBPQ92793 2442 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 C1orf226A1L170 272 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 PINLYPA6NC86 204 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 GOLGA8RI6L899 631 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 DLX3O60479 287 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 ZNF354AO60765 605 aaPredicted RBP15.56■□□□□ 0.08
CLK3-210ENST00000563112 PYGBP11216 843 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 HSD3B1P14060 373 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 IMPDH1P20839 514 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 HSD3B2P26439 372 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 SERPINB3P29508 390 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 SLC37A1P57057 533 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 ZNF630Q2M218 657 aaPredicted RBP15.56■□□□□ 0.08
CLK3-210ENST00000563112 UNC50Q53HI1 259 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 ZNF678Q5SXM1 525 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 GPRIN3Q6ZVF9 776 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 COMMD6Q7Z4G1 85 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 FGD2Q7Z6J4 655 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 TAGAPQ8N103 731 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 CDYL2Q8N8U2 506 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 EIF1ADQ8N9N8 165 aaKnown RBP15.56■□□□□ 0.08
CLK3-210ENST00000563112 UCN3Q969E3 161 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 MARVELD3Q96A59 401 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 SPACA9Q96E40 222 aaPredicted RBP15.56■□□□□ 0.08
CLK3-210ENST00000563112 TTTY12Q9BZ98 90 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 WWTR1Q9GZV5 400 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 CXorf21Q9HAI6 301 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 FARSBQ9NSD9 589 aaKnown RBP15.56■□□□□ 0.08
CLK3-210ENST00000563112 VPS29Q9UBQ0 182 aa15.56■□□□□ 0.08
CLK3-210ENST00000563112 ZNF407Q9C0G0 2248 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 A0A1B0GTL3 188 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 C2orf92A0A1B0GVN3 265 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CCDC151A5D8V7 595 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 GOLGA6L10A6NI86 522 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CAPN14A8MX76 684 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 MANBAO00462 879 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 ULK1O75385 1050 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CLDN14O95500 239 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CCL3P10147 92 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 CPMP14384 443 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 PORP16435 677 aaPredicted RBP15.55■□□□□ 0.08
CLK3-210ENST00000563112 NT5EP21589 574 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 HMOX2P30519 316 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 PRKAA2P54646 552 aa15.55■□□□□ 0.08
CLK3-210ENST00000563112 EBPQ15125 230 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms