RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CNTN4Q8IWV2 1026 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 PRSS58Q8IYP2 241 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 DSELQ8IZU8 1212 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 METTL25Q8N6Q8 603 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ENDOVQ8N8Q3 282 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 AMER3Q8N944 861 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 GPATCH11Q8N954 259 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 OR2L3Q8NG85 312 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 OR2L8Q8NGY9 312 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 GRK7Q8WTQ7 553 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SNRNP27Q8WVK2 155 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 ANP32BQ92688 251 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 MR1Q95460 341 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.02□□□□□ -1.77
SPG11-211ENST00000558561 RAD51AP1Q96B01 352 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 HIST1H2AAQ96QV6 131 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 OR4K3Q96R72 315 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 DPH7Q9BTV6 452 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TUBB2BQ9BVA1 445 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 DPCDQ9BVM2 203 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 KLHL31Q9H511 634 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 STN1Q9H668 368 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 PDE7BQ9NP56 450 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 HEYLQ9NQ87 328 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 DUSP22Q9NRW4 184 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SOHLH2Q9NX45 425 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 UTP6Q9NYH9 597 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 EURLQ9NYK6 297 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TAC3Q9UHF0 121 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 GNPTGQ9UJJ9 305 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ADAM21Q9UKJ8 722 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 PADI1Q9ULC6 663 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SLC39A10Q9ULF5 831 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 FARSAQ9Y285 508 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 FASNP49327 2511 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 NBASA2RRP1 2371 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TCRBV9S1A1TA0A576 114 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ARGFXA6NJG6 315 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 FAM159BA6NKW6 160 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 A6NL46 340 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CYSRT1A8MQ03 144 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 C4orf51C9J302 202 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 E5RI56 91 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 H0YIZ8 118 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 QSOX1O00391 747 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 HAT1O14929 419 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TOX3O15405 576 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 ZBTB14O43829 449 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SH3BGRLO75368 114 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CREG1O75629 220 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ZNF189O75820 626 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 KLF7O75840 302 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 OR2B3O76000 313 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 NUDT3O95989 172 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 UMODP07911 640 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CELA2AP08217 269 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 RHOXF2BP0C7M4 288 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 MPC1LP0DKB6 136 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ERGP11308 486 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 GCAP28676 217 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SHMT2P34897 504 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SKIV2L2P42285 1042 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 HSPA7P48741 367 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CCL11P51671 97 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PNLIPRP1P54315 467 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 ADARP55265 1226 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 ARL4CP56559 192 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 EEFSECP57772 596 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 CSNK1G2P78368 415 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 MAT1AQ00266 395 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 ACY1Q03154 408 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PRDX1Q06830 199 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 PRKAA1Q13131 559 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 FHL3Q13643 280 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 KIR2DS3Q14952 304 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 OR4D1Q15615 310 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 IGFBP7Q16270 282 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SLC5A12Q1EHB4 618 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 MPEG1Q2M385 716 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 KBTBD12Q3ZCT8 623 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TAF1BQ53T94 588 aaPredicted RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 ZNF425Q6IV72 752 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 AGTRAPQ6RW13 159 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 FAM198BQ6UWH4 519 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 SBSNQ6UWP8 590 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 CLEC9AQ6UXN8 241 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 UNC5DQ6UXZ4 953 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 KIAA0408Q6ZU52 694 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 Q6ZWC4 215 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 RPS27LQ71UM5 84 aaKnown RBP4.01□□□□□ -1.77
SPG11-211ENST00000558561 VN1R4Q7Z5H5 301 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PCGF5Q86SE9 256 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PAQR7Q86WK9 346 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 LRRC6Q86X45 466 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 TMEM126BQ8IUX1 230 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 DCUN1D3Q8IWE4 304 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 PDIK1LQ8N165 341 aa4.01□□□□□ -1.77
SPG11-211ENST00000558561 RNF175Q8N4F7 328 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms