RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 TOM1L1O75674 476 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ZNF432O94892 652 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 NDUFA7O95182 113 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 AMBPP02760 352 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 FCER2P06734 321 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 FAM200BP0CF97 657 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TSPY4P0CV99 314 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TSPY10P0CW01 314 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ANOS1P23352 680 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TMOD1P28289 359 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ADSSP30520 456 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ADRA1AP35348 466 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ZFP36L2P47974 494 aaKnown RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 NDST1P52848 882 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 MTTPP55157 894 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 OVGP1Q12889 678 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 NME3Q13232 169 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 RAPSNQ13702 412 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 BTG3Q14201 252 aaPredicted RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 SLC17A1Q14916 467 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 KRTAP24-1Q3LI83 254 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ANKDD1AQ495B1 522 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ACSF3Q4G176 576 aaPredicted RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 KLHL22Q53GT1 634 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 SULT1C3Q6IMI6 304 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 STEAP1BQ6NZ63 245 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 PPP1R42Q7Z4L9 355 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 CUZD1Q86UP6 607 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 NR2C2APQ86WQ0 139 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 GRAMD2AQ8IUY3 354 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 MISPQ8IVT2 679 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TBC1D21Q8IYX1 336 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ARFGAP2Q8N6H7 521 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 GVQW1Q8N7I0 195 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 FAM76AQ8TAV0 307 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 RDH11Q8TC12 318 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TMEM37Q8WXS4 190 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 FCGR1BQ92637 280 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 SLCO2A1Q92959 643 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 GMPPAQ96IJ6 420 aaPredicted RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 MAGED4Q96JG8 741 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 CAPNS2Q96L46 248 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 LRR1Q96L50 414 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 LITAFQ99732 161 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 CRACR2AQ9BSW2 395 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 NDUFAF3Q9BU61 184 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TEX13BQ9BXU2 312 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 MRPL13Q9BYD1 178 aaKnown RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 WDR13Q9H1Z4 485 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 FAM124BQ9H5Z6 455 aaPredicted RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 CALHM2Q9HA72 323 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 VAT1LQ9HCJ6 419 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 IL1RAPQ9NPH3 570 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 CENPMQ9NSP4 180 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 VPS54Q9P1Q0 977 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ERVK-18Q9QC07 812 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 P2RX2Q9UBL9 471 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 CACNG5Q9UF02 275 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 LNPEPQ9UIQ6 1025 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 ZNF490Q9ULM2 529 aaPredicted RBP2.52□□□□□ -2.01
CD44-234ENST00000531873 MFHAS1Q9Y4C4 1052 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 WIPI2Q9Y4P8 454 aa2.52□□□□□ -2.01
CD44-234ENST00000531873 TDRD15B5MCY1 1934 aaKnown RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 A0A087WYN8 130 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 IGHV3-38A0A0C4DH36 116 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TRBV5-4A0A0C4DH59 114 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TRIM49BA6NDI0 452 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 IFITM10A6NMD0 228 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 MEI4A8MW99 385 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 LGALS8O00214 317 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 ANGPT2O15123 496 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 BUB1O43683 1085 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TSPAN2O60636 221 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 STK17BO94768 372 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 KRT8P05787 483 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 CA3P07451 260 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 CFC1BP0CG36 223 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 CFC1P0CG37 223 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 RRASP10301 218 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 GP9P14770 177 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 PTPN6P29350 595 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 FCGR2BP31994 310 aaPredicted RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 ID1P41134 155 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TSFMP43897 325 aaKnown RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 SGSHP51688 502 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 NDST2P52849 883 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 SNRPD1P62314 119 aaKnown RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 RBBP4Q09028 425 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 GCKRQ14397 625 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 MLF2Q15773 248 aaPredicted RBP2.51□□□□□ -2.01
CD44-234ENST00000531873 FAM189A2Q15884 450 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 HLA-BQ31612 363 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 TMEM41BQ5BJD5 291 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 C1orf189Q5VU69 101 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 SLC39A4Q6P5W5 647 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 KIF6Q6ZMV9 814 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 FRRS1Q6ZNA5 592 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 C18orf65Q6ZTR6 163 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 PAQR9Q6ZVX9 377 aa2.51□□□□□ -2.01
CD44-234ENST00000531873 GPR142Q7Z601 462 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms