RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RIC8BQ9NVN3 520 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MS4A12Q9NXJ0 267 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SH3BP4Q9P0V3 963 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 C19orf25Q9UFG5 118 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 BCAP29Q9UHQ4 241 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 HAO1Q9UJM8 370 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ADAM29Q9UKF5 820 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 DTX4Q9Y2E6 619 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MMACHCQ9Y4U1 282 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CLCA3PQ9Y6N3 262 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD12Q6UB98 2062 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SCN3AQ9NY46 2000 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 A0A0G2JND7 137 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM200CA6NKL6 621 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TRPC5OSA6NMA1 111 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 G3V3Y1 287 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 MKRN2OSH3BPM6 223 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SCAMP2O15127 329 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 WISP2O76076 250 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 CPSF4O95639 269 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 C6orf47O95873 294 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 WDPCPO95876 746 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 CLPSP04118 112 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ALPPP05187 535 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SERPINA7P05543 415 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC35E2P0CK97 266 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 COX7A2P14406 83 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 DRD2P14416 443 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PORP16435 677 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 CSNK2A2P19784 350 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 NCF2P19878 526 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 DDCP20711 480 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PRPH2P23942 346 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 MC3RP41968 323 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 STT3AP46977 705 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 RNF144AP50876 292 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ARFIP1P53367 373 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PRKAG1P54619 331 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 RRADP55042 308 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TRA2BP62995 288 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 GNGT1P63211 74 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 IGLV3-21P80748 117 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 RHDQ02161 417 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OC90Q02509 493 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 EMX2Q04743 252 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 MGAT2Q10469 447 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 AIMP2Q13155 320 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SERTAD2Q14140 314 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 MYBPC3Q14896 1274 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 HEPACAMQ14CZ8 416 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PRICKLE4Q2TBC4 344 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 LSM12Q3MHD2 195 aaKnown RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 CRTC2Q53ET0 693 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SOWAHCQ53LP3 525 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PRR30Q53SZ7 412 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 C10orf62Q5T681 223 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PLAG1Q6DJT9 500 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR4F3Q6IEY1 312 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 PAOXQ6QHF9 649 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 EPGNQ6UW88 154 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM107Q6UX40 140 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ASB18Q6ZVZ8 466 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 GALNT10Q86SR1 603 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 LSRQ86X29 649 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 APLFQ8IW19 511 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 GALNT12Q8IXK2 581 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 C9orf40Q8IXQ3 194 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ST13P4Q8IZP2 240 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 BEST3Q8N1M1 668 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 LRRC25Q8N386 305 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ARFGAP2Q8N6H7 521 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 B3GNT7Q8NFL0 401 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR7G2Q8NG99 324 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR52R1Q8NGF1 315 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR5M3Q8NGP4 307 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR9I1Q8NGQ6 314 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 OR5AK3PQ8NH89 298 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 C9orf43Q8TAL5 461 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ADAMTS18Q8TE60 1221 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF681Q96N22 645 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 RILPQ96NA2 401 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SIGLEC12Q96PQ1 595 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 LMF1Q96S06 567 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TUBB6Q9BUF5 446 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM120AQ9BXJ8 343 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 DEFB126Q9BYW3 111 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 GLIPR2Q9H4G4 154 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 REEP4Q9H6H4 257 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 CXorf21Q9HAI6 301 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 ADAP2Q9NPF8 381 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 EQTNQ9NQ60 294 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 KLHL1Q9NR64 748 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 SIRT5Q9NXA8 310 aa4.28□□□□□ -1.72
CHMP4A-202ENST00000524955 STMN3Q9NZ72 180 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms