RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SELENOHQ8IZQ5 122 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 FAM58AQ8N1B3 248 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 GPD1LQ8N335 351 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SFRP1Q8N474 314 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 FAM89BQ8N5H3 189 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 PQLC3Q8N755 202 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TSEN2Q8NCE0 465 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ITFG1Q8TB96 612 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 RLN3Q8WXF3 142 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NR4A3Q92570 626 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 AP3S1Q92572 193 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM203Q969S6 136 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SLAMF9Q96A28 289 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 DNAJC19Q96DA6 116 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TMCO6Q96DC7 493 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TEFMQ96QE5 360 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SIGLEC11Q96RL6 698 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SLC30A3Q99726 388 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TRMT61BQ9BVS5 477 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ERVK-6Q9BXR3 956 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TM6SF2Q9BZW4 377 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NIF3L1Q9GZT8 377 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 HAPLN2Q9GZV7 340 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SMOC2Q9H3U7 446 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 KIR3DX1Q9H7L2 352 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NIPAL2Q9H841 368 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NGBQ9NPG2 151 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 HCFC1R1Q9NWW0 138 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 XPR1Q9UBH6 696 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 INTS6Q9UL03 887 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 BAIAP2Q9UQB8 552 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MYO15AQ9UKN7 3530 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 KIF26AQ9ULI4 1882 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PLSCR5A0PG75 271 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ERI2A8K979 691 aaKnown RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LGALS8O00214 317 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 FOXE1O00358 373 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CYB561D2O14569 222 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CHADO15335 359 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 DLEU1O43261 78 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LAMTOR5O43504 91 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 BUD23O43709 281 aaKnown RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ENTPD5O75356 428 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PAGE1O75459 146 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 WBP4O75554 376 aaKnown RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CH25HO95992 272 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SERPINA3P01011 423 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TGFAP01135 160 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 HEXAP06865 529 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 GIMD1P0DJR0 217 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 IFNGR1P15260 489 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CEBPBP17676 345 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 AMPD1P23109 780 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PRKCHP24723 683 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PEX2P28328 305 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 GCAP28676 217 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ARL3P36405 182 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LHX1P48742 406 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 UBE2G2P60604 165 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SLC7A9P82251 487 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 MTAPQ13126 283 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TNK1Q13470 666 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 IL18R1Q13478 541 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PTK6Q13882 451 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LRRC32Q14392 662 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 GRM7Q14831 915 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 BAK1Q16611 211 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 KIF19Q2TAC6 998 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TIGD3Q6B0B8 471 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 KRT80Q6KB66 452 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CES3Q6UWW8 571 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CYHR1Q6ZMK1 362 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TPRG1Q6ZUI0 275 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM26Q6ZUK4 368 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SH2D5Q6ZV89 423 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 LDB1Q86U70 411 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-216ENST00000523088 AMZ2Q86W34 360 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 C1orf210Q8IVY1 113 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 MFSD6LQ8IWD5 586 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 RDH10Q8IZV5 341 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 TOP6BLQ8N6T0 577 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 PACRGLQ8N7B6 248 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 BEND2Q8NDZ0 799 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 DMBX1Q8NFW5 382 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 SPATA22Q8NHS9 363 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 ACTRT1Q8TDG2 376 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 BPIFB1Q8TDL5 484 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 CSGALNACT1Q8TDX6 532 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 NEK7Q8TDX7 302 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 NSMAFQ92636 917 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 RAB1CQ92928 201 aa7.17□□□□□ -1.26
HDAC3-216ENST00000523088 KTI12Q96EK9 354 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms