RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	SNRNP27	Q8WVK2	155 aa	Known RBP	7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	DYDC1	Q8WWB3	177 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZNF501	Q96CX3	271 aa	Predicted RBP	7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	LRFN5	Q96NI6	719 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZNF382	Q96SR6	550 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	AIF1L	Q9BQI0	150 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	NTMT1	Q9BV86	223 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	DPH1	Q9BZG8	443 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	DRC3	Q9H069	523 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	SPNS1	Q9H2V7	528 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	FAM60A	Q9NP50	221 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	INTS9	Q9NV88	658 aa	Known RBP	7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	FBXO34	Q9NWN3	711 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	PLA2G3	Q9NZ20	509 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	PILRA	Q9UKJ1	303 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	CELSR3	Q9NYQ7	3312 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	SNRNP200	O75643	2136 aa	Known RBP	7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	ADAMTS20	P59510	1910 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	EPG5	Q9HCE0	2579 aa		7.01	□□□□□ -1.29
GARNL3-222	ENST00000498801	PCM1	Q15154	2024 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	KCNE1B	A0A087WTH5	132 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801		A0A0J9YVX5	310 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FEZF1	A0PJY2	475 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	EFCAB7	A8K855	629 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	STMND1	H3BQB6	276 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	OR1F1	O43749	312 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	SLC43A1	O75387	559 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	OR4F21	O95013	312 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	TNFSF15	O95150	251 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ESRRB	O95718	433 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	HSPA4L	O95757	839 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ENO1	P06733	434 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	CHRNG	P07510	517 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	LIPC	P11150	499 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	HGF	P14210	728 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FOLR1	P15328	257 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ITIH1	P19827	911 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	CXCR2	P25025	360 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	RBMS1	P29558	406 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	EIF2S3	P41091	472 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	HNF4A	P41235	474 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	PRIM2	P49643	509 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ABCE1	P61221	599 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	RPS15A	P62244	130 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	GALNT1	Q10472	559 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	STX3	Q13277	289 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	TUBB3	Q13509	450 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	RBBP5	Q15291	538 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZRSR2	Q15696	482 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	DEFB110	Q30KQ9	67 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	GGTA1P	Q4G0N0	100 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ARL13A	Q5H913	290 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	DCAF12	Q5T6F0	453 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	CES4A	Q5XG92	561 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FRMPD2B	Q6IN97	320 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	MED27	Q6P2C8	311 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FBXO42	Q6P3S6	717 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	TMIGD1	Q6UXZ0	262 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	SYVN1	Q86TM6	617 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	L3MBTL4	Q8NA19	623 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	MFSD9	Q8NBP5	474 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZNF248	Q8NDW4	579 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FAM76A	Q8TAV0	307 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	TFAP2C	Q92754	450 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	N4BP2L2	Q92802	583 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FGF11	Q92914	225 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	UBE2E3	Q969T4	207 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	RERG	Q96A58	199 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	KCNC2	Q96PR1	638 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	OR2A5	Q96R48	311 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	OR6C1	Q96RD1	312 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	CPPED1	Q9BRF8	314 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	SHCBP1L	Q9BZQ2	653 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	NT5DC2	Q9H857	520 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FANCE	Q9HB96	536 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	EML4	Q9HC35	981 aa	Known RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	MID1IP1	Q9NPA3	183 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FGF21	Q9NSA1	209 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	OCIAD1	Q9NX40	245 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	JKAMP	Q9P055	326 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	FOXJ2	Q9P0K8	574 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	PPP4R1L	Q9P1A2	415 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	PISD	Q9UG56	409 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZNF225	Q9UK10	706 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	ZNF490	Q9ULM2	529 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	PLCL2	Q9UPR0	1127 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	RNF11	Q9Y3C5	154 aa		7	□□□□□ -1.29
GARNL3-222	ENST00000498801	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7	□□□□□ -1.29
GARNL3-222	ENST00000498801	LOC105369274	A0A096LPK9	316 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	LOC102723532	A0A0G2JNH3	316 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	LOC100996750	A0A140TA64	210 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	PRSS29P	A6NIE9	313 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	TMEM150C	B9EJG8	249 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801		H0YGG7	62 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801		H0YIV9	168 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	TAF4	O00268	1085 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	KLF11	O14901	512 aa		6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	POLR1C	O15160	346 aa	Predicted RBP	6.99	□□□□□ -1.29
GARNL3-222	ENST00000498801	GPR42	O15529	346 aa		6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms