RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CCDC116Q8IYX3 515 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ZFP28Q8NHY6 868 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ADAMTS17Q8TE56 1095 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 NUDT8Q8WV74 236 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 C8orf44Q96CB5 159 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ACSS1Q9NUB1 689 aaPredicted RBP20.36■□□□□ 0.85
C9orf3-222ENST00000496567 RAXQ9Y2V3 346 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 A0A1W2PQ72 361 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 A0A1W2PS29 197 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 PEX12O00623 359 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 SLC22A2O15244 555 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 DCTN3O75935 186 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 PGRP06401 933 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 TNNI3P19429 210 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 FRKP42685 505 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-222ENST00000496567 NCBP2P52298 156 aaKnown RBP eCLIP20.35■□□□□ 0.856e-7■■■■■ 27.1
C9orf3-222ENST00000496567 MANFP55145 182 aaKnown RBP20.35■□□□□ 0.85
C9orf3-222ENST00000496567 KCNK10P57789 538 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 MPEG1Q2M385 716 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 C6orf163Q5TEZ5 329 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 OR4F3Q6IEY1 312 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 KIRREL2Q6UWL6 708 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 DAZLQ92904 295 aaKnown RBP20.35■□□□□ 0.85
C9orf3-222ENST00000496567 CIDECQ96AQ7 238 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-222ENST00000496567 LPAR4Q99677 370 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 FAM120CQ9NX05 1096 aaKnown RBP20.35■□□□□ 0.85
C9orf3-222ENST00000496567 CLCA3PQ9Y6N3 262 aa20.35■□□□□ 0.85
C9orf3-222ENST00000496567 A0A1W2PRB8 838 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 DYTNA2CJ06 578 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 C9JVG2 144 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 EEF1A2Q05639 463 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 UBAP2LQ14157 1087 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 RCAN2Q14206 197 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 BLOC1S3Q6QNY0 202 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 MRGPREQ86SM8 312 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 FUNDC1Q8IVP5 155 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 OR11G2Q8NGC1 345 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 OR14A16Q8NHC5 309 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 RIT1Q92963 219 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 PPWD1Q96BP3 646 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 AMDHD1Q96NU7 426 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 ZNF700Q9H0M5 742 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 GLIPR2Q9H4G4 154 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 CAPN7Q9Y6W3 813 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 APC2O95996 2303 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 IGHV1-45A0A0A0MS14 117 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 CDC14CA4D256 554 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 A8MUA0 341 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 RNASET2O00584 256 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 WT1P19544 449 aaPredicted RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 NT5EP21589 574 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 ZFP36L2P47974 494 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 DGKQP52824 942 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 DUSP2Q05923 314 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 LRRC74AQ0VAA2 488 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 KLF10Q13118 480 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 MLC1Q15049 377 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 PAPD4Q6PIY7 484 aaKnown RBP20.34■□□□□ 0.85
C9orf3-222ENST00000496567 CCDC81Q6ZN84 652 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 NDUFAF7Q7L592 441 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 GALNT12Q8IXK2 581 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 SUN3Q8TAQ9 357 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 THAP4Q8WY91 577 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 OR52E6Q96RD3 313 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 TUBB6Q9BUF5 446 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 SLAMF7Q9NQ25 335 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 P4HTMQ9NXG6 502 aa20.34■□□□□ 0.85
C9orf3-222ENST00000496567 ACACAQ13085 2346 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 IGHV3-20A0A0C4DH32 117 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 PRSS51A0A1B0GVH4 220 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 SAGE2PA6NJ88 616 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 C17orf105B2RV13 164 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 NR5A2O00482 541 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 CFLARO15519 480 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 NKX2-8O15522 239 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 EFSO43281 561 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 SLITRK5O94991 958 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 COX6A1P12074 109 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 UCNP55089 124 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 WNT3P56703 355 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 TLE3Q04726 772 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 PCOLCEQ15113 449 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 MSANTD1Q6ZTZ1 278 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 TSPEARQ8WU66 669 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 PTPMT1Q8WUK0 201 aaPredicted RBP20.33■□□□□ 0.84
C9orf3-222ENST00000496567 OR5P2Q8WZ92 322 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 SPDL1Q96EA4 605 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 LRRC37BQ96QE4 947 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 MESP1Q9BRJ9 268 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 MYLK2Q9H1R3 596 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 CXorf21Q9HAI6 301 aa20.33■□□□□ 0.84
C9orf3-222ENST00000496567 NSG1A0A0A6YYJ2 146 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 CCDC154A6NI56 674 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 PHC1P78364 1004 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 MAP4K2Q12851 820 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 MAPRE2Q15555 327 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 SPRED3Q2MJR0 410 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 TIGD2Q4W5G0 525 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 KDF1Q8NAX2 398 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-222ENST00000496567 MORN4Q8NDC4 146 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms