RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FAIM2Q9BWQ8 316 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 EPB41L4BQ9H329 900 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 FARSBQ9NSD9 589 aaKnown RBP16.16■□□□□ 0.18
SEC13-218ENST00000490283 VPS29Q9UBQ0 182 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 TINAGQ9UJW2 476 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PSME2Q9UL46 239 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 ZNF835Q9Y2P0 537 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 A0A1B0GTL3 188 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 C1orf226A1L170 272 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 SMIM23A6NLE4 172 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 MANBAO00462 879 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 PGRMC2O15173 223 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 HS6ST1O60243 411 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 ULK1O75385 1050 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 MYL2P10916 166 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 CCT5P48643 541 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 SMSP52788 366 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 PKNOX1P55347 436 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 NAA20P61599 178 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 TBL3Q12788 808 aaKnown RBP16.15■□□□□ 0.18
SEC13-218ENST00000490283 LCP2Q13094 533 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 ZNF750Q32MQ0 723 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 RNFT1Q5M7Z0 435 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 HLA-DQA1Q5Y7H0 255 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 Q6ZPB1 254 aaPredicted RBP16.15■□□□□ 0.18
SEC13-218ENST00000490283 DGAT2L6Q6ZPD8 337 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 RGS9BPQ6ZS82 235 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 FAM47EQ6ZV65 393 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 SLC22A16Q86VW1 577 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 TAGAPQ8N103 731 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 ZNF808Q8N4W9 903 aaPredicted RBP16.15■□□□□ 0.18
SEC13-218ENST00000490283 OR2M7Q8NG81 312 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 L3HYPDHQ96EM0 354 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 FAM173AQ9BQD7 235 aa16.15■□□□□ 0.18
SEC13-218ENST00000490283 WASHC1A8K0Z3 465 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 WISP2O76076 250 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 ENO1P06733 434 aaKnown RBP16.14■□□□□ 0.17
SEC13-218ENST00000490283 CNR1P21554 472 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 NT5EP21589 574 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 COL8A1P27658 744 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 SERPINB3P29508 390 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 PTGER1P34995 402 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 PTGS2P35354 604 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 SLCO1A2P46721 670 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 XKP51811 444 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 PPIAP62937 165 aaKnown RBP16.14■□□□□ 0.17
SEC13-218ENST00000490283 HSF1Q00613 529 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 CCDC153Q494R4 210 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 MRGPRGQ86SM5 289 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 SLC34A3Q8N130 599 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 C1orf52Q8N6N3 182 aaKnown RBP16.14■□□□□ 0.17
SEC13-218ENST00000490283 CCNYL1Q8N7R7 359 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 GBP7Q8N8V2 638 aaPredicted RBP16.14■□□□□ 0.17
SEC13-218ENST00000490283 CCDC63Q8NA47 563 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 DOK4Q8TEW6 326 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 MZB1Q8WU39 189 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 HBEGFQ99075 208 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 WWTR1Q9GZV5 400 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 GRID1Q9ULK0 1009 aa16.14■□□□□ 0.17
SEC13-218ENST00000490283 CAPN14A8MX76 684 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 PRSS44E7EML9 344 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 G3V3Y1 287 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 HRKO00198 91 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 CRCPO75575 148 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 ESRRBO95718 433 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 SHBGP04278 402 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 CPMP14384 443 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 PORP16435 677 aaPredicted RBP16.13■□□□□ 0.17
SEC13-218ENST00000490283 SLC37A1P57057 533 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 TRA2BP62995 288 aaKnown RBP16.13■□□□□ 0.17
SEC13-218ENST00000490283 GALNT1Q10472 559 aaPredicted RBP16.13■□□□□ 0.17
SEC13-218ENST00000490283 ART3Q13508 389 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 CFAP157Q5JU67 520 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 SLC22A10Q63ZE4 541 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 SLC48A1Q6P1K1 146 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 ARHGAP11AQ6P4F7 1023 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 ZYG11AQ6WRX3 759 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 TDRPQ86YL5 185 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 SPACA9Q96E40 222 aaPredicted RBP16.13■□□□□ 0.17
SEC13-218ENST00000490283 CXorf21Q9HAI6 301 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 DEPPQ9NTK1 212 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 MID2Q9UJV3 735 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 ZNF225Q9UK10 706 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 PCDHA9Q9Y5H5 950 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 ZNF780BQ9Y6R6 833 aa16.13■□□□□ 0.17
SEC13-218ENST00000490283 DIDO1Q9BTC0 2240 aaKnown RBP16.13■□□□□ 0.17
SEC13-218ENST00000490283 A0A1B0GTH9 108 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 C2orf92A0A1B0GVN3 265 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 A0A1W2PPM1 405 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 FAM166BA8MTA8 275 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 H3BQF6 201 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 COPEO14579 308 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 CDH16O75309 829 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 ERAL1O75616 437 aaKnown RBP16.12■□□□□ 0.17
SEC13-218ENST00000490283 TPOP07202 933 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 DCTP40126 519 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 ALDH9A1P49189 494 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 TMED10P49755 219 aaKnown RBP16.12■□□□□ 0.17
SEC13-218ENST00000490283 NRG3P56975 720 aa16.12■□□□□ 0.17
SEC13-218ENST00000490283 ACSM2AQ08AH3 577 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms