RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TRBC2A0A5B9 178 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 H0Y3Z8 333 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 HCRTR2O43614 444 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 SSX4O60224 188 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 STK10O94804 968 aaKnown RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 VENTXO95231 258 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 ETHE1O95571 254 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 CD8AP01732 235 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 IFNA16P05015 189 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 SERPIND1P05546 499 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 TMEM253P0C7T8 217 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 RBP3P10745 1247 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 COMTP21964 271 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 CHMP24386 653 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 GRK3P35626 688 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 HNF4AP41235 474 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 MARCKSL1P49006 195 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 PRAMEP78395 509 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 RGS1Q08116 209 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 SLC13A2Q13183 592 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 NTRK2Q16620 822 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 PHKG1Q16816 387 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 FAM166AQ6J272 317 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 DND1Q8IYX4 353 aaKnown RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 MPP5Q8N3R9 675 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 SLC15A4Q8N697 577 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 FAM83FQ8NEG4 500 aaPredicted RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 SEMA6DQ8NFY4 1073 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 GIMAP7Q8NHV1 300 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 SMAP2Q8WU79 429 aaPredicted RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 ZFAND2BQ8WV99 257 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 ATL1Q8WXF7 558 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 LPGAT1Q92604 370 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 NEUROG1Q92886 237 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 FBXW5Q969U6 566 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 FAM118BQ9BPY3 351 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 TRAF4Q9BUZ4 470 aaPredicted RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 HEMGNQ9BXL5 484 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 NUP62CLQ9H1M0 184 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 EML4Q9HC35 981 aaKnown RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 EIF2B3Q9NR50 452 aaKnown RBP7.44□□□□□ -1.22
XRN1-212ENST00000486211 HEY2Q9UBP5 337 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 ZFP69BQ9UJL9 534 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 TMEM89A2RUT3 159 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 GRID2IPA4D2P6 1211 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 C17orf105B2RV13 164 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 CYR61O00622 381 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 PSTPIP1O43586 416 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 NDUFS3O75489 264 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 IGKV3-11P04433 115 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 RPLP1P05386 114 aaKnown RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 NPPBP16860 134 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 PAMP19021 973 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 HNF1AP20823 631 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 TBXA2RP21731 343 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ADRA1DP25100 572 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 PTPN6P29350 595 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 SSTR4P31391 388 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 FMO4P31512 558 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 AHRP35869 848 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 SLC1A1P43005 524 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 CCR8P51685 355 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 CLCN7P51798 805 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 RAB38P57729 211 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 EIF3EP60228 445 aaKnown RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 SRYQ05066 204 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 FUT7Q11130 342 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 FAPQ12884 760 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 LCTLQ6UWM7 567 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 SBSNQ6UWP8 590 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 CYHR1Q6ZMK1 362 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 YRDCQ86U90 279 aaKnown RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 GRAMD2AQ8IUY3 354 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ZNF595Q8IYB9 648 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 PLD6Q8N2A8 252 aaKnown RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 PRELID2Q8N945 189 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 CNEP1R1Q8N9A8 125 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ANKRD53Q8N9V6 530 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ZNF610Q8N9Z0 462 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 FAM47BQ8NA70 645 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 OR8K1Q8NGG5 319 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 PEX13Q92968 403 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 REPS1Q96D71 796 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 C11orf24Q96F05 449 aaPredicted RBP7.43□□□□□ -1.22
XRN1-212ENST00000486211 RILPQ96NA2 401 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 CSF3RQ99062 836 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 MANSC1Q9H8J5 431 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 CHMP5Q9NZZ3 219 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ANAPC5Q9UJX4 755 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 AMFRQ9UKV5 643 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 TCAF1Q9Y4C2 921 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 ALPK2Q86TB3 2170 aa7.43□□□□□ -1.22
XRN1-212ENST00000486211 SYNDIG1LA6NDD5 238 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 PLOD2O00469 737 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 SPOPO43791 374 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms