RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PKN2Q16513 984 aaKnown RBP4.57□□□□□ -1.68
SF3B1-210ENST00000482158 FAM182AQ5T1J6 154 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 C9orf66Q5T8R8 295 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 LIPJQ5W064 366 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 STXBP4Q6ZWJ1 553 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF781Q8N8C0 355 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 CCNYQ8ND76 341 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 OR1K1Q8NGR3 316 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 COG3Q96JB2 828 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 RUFY1Q96T51 708 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 JPT2Q9H910 190 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 GTSE1Q9NYZ3 720 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 MOSPD1Q9UJG1 213 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.57□□□□□ -1.68
SF3B1-210ENST00000482158 KLHDC2Q9Y2U9 406 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 IGHV3-16A0A0C4DH30 117 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 TMEM89A2RUT3 159 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 MEI4A8MW99 385 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SLC4A1P02730 911 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 CXCL10P02778 98 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 FCER2P06734 321 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 TRIM23P36406 574 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 NLRP11P59045 1033 aaKnown RBP4.56□□□□□ -1.68
SF3B1-210ENST00000482158 RPS4XP62701 263 aaKnown RBP4.56□□□□□ -1.68
SF3B1-210ENST00000482158 KLF5Q13887 457 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-210ENST00000482158 RHBDD2Q6NTF9 364 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 TIPARPQ7Z3E1 657 aaKnown RBP4.56□□□□□ -1.68
SF3B1-210ENST00000482158 ADGRD2Q7Z7M1 963 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SLC47A2Q86VL8 602 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 OR8H1Q8NGG4 311 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SLC13A3Q8WWT9 602 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SOSTQ9BQB4 213 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SIRPDQ9H106 197 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 HEXA-AS1Q9H8Q6 139 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 COPS7AQ9UBW8 275 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 RARRES3Q9UL19 164 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 FBXO7Q9Y3I1 522 aa4.56□□□□□ -1.68
SF3B1-210ENST00000482158 SRRM5B3KS81 715 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 SHISA9B4DS77 424 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 SH2D1BO14796 132 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 TXNL1O43396 289 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 HTATSF1O43719 755 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 DUSP11O75319 330 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 TBX6O95947 436 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 IGHV3-13P01766 116 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ACP1P24666 158 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 SHC1P29353 583 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 MARCKSP29966 332 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 MAT2AP31153 395 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 SLC1A4P43007 532 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 RIDAP52758 137 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 MS4A2Q01362 244 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 PDK1Q15118 436 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 TRADDQ15628 312 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF528Q3MIS6 628 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF772Q68DY9 489 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 STEAP1BQ6NZ63 245 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 BNIPLQ7Z465 357 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 GPR142Q7Z601 462 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 GTSCR1Q86UQ5 136 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 BATF2Q8N1L9 274 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF619Q8N2I2 560 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 C4orf32Q8N8J7 132 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 TMEM186Q96B77 213 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 NTNG2Q96CW9 530 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ACCSQ96QU6 501 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 HSD17B14Q9BPX1 270 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 SPXQ9BT56 116 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 XPO4Q9C0E2 1151 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 DDX47Q9H0S4 455 aaKnown RBP4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ADNPQ9H2P0 1102 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 VPS54Q9P1Q0 977 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 KCNN3Q9UGI6 736 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 STYXL1Q9Y6J8 313 aa4.55□□□□□ -1.68
SF3B1-210ENST00000482158 ZMYM6O95789 1325 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 FAM205AQ6ZU69 1335 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 BCLAF3A2AJT9 711 aaKnown RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 HSF2BPO75031 334 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 SYNGR4O95473 234 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 HPRP00739 348 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ALPPP05187 535 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 PGK2P07205 417 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 HOXD4P09016 255 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 OR9G9P0C7N8 305 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ZCCHC18P0CG32 403 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ALPPL2P10696 532 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 PPP2R1AP30153 589 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ACADSBP45954 432 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ACY1Q03154 408 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 FCHO2Q0JRZ9 810 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 UNC50Q53HI1 259 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 CMPK2Q5EBM0 449 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 MYPOPQ86VE0 399 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 CATSPER3Q86XQ3 398 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 LINC00518Q8N0U6 118 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF491Q8N8L2 437 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 CCDC47Q96A33 483 aaKnown RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ANKRD27Q96NW4 1050 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms