RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 OR4N5Q8IXE1 308 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 TMEM151AQ8N4L1 468 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 CCNYL1Q8N7R7 359 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 ZNF721Q8TF20 911 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 RELTQ969Z4 430 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 GAL3ST4Q96RP7 486 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 ZNF717Q9BY31 904 aaPredicted RBP9.48□□□□□ -0.89
CCM2-208ENST00000476594 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
CCM2-208ENST00000476594 HES7Q9BYE0 225 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 SACM1LQ9NTJ5 587 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 MCM8Q9UJA3 840 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 ZNF223Q9UK11 482 aaPredicted RBP9.48□□□□□ -0.89
CCM2-208ENST00000476594 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 ERVK-19Q9WJR5 959 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 ZNF780BQ9Y6R6 833 aa9.48□□□□□ -0.89
CCM2-208ENST00000476594 MYOCOSA0A1B0GUC4 107 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 GNG14A0A1W2PPG7 69 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 A0A1W2PR48 441 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 WIPF3A6NGB9 483 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 GLOD5A6NK44 160 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 MANBAO00462 879 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 TP53I11O14683 189 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 ASNA1O43681 348 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 SLU7O95391 586 aaKnown RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 CHEK2O96017 543 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 GBAP04062 536 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 IGKV3-11P04433 115 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 PORP16435 677 aaPredicted RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 KRT4P19013 534 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 TSPAN8P19075 237 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 NT5EP21589 574 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 MST1P26927 711 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 SOX3P41225 446 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 CA7P43166 264 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 XKP51811 444 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 SMSP52788 366 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 HEPACAMQ14CZ8 416 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 C1QL3Q5VWW1 255 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 FAM47EQ6ZV65 393 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 SULF2Q8IWU5 870 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 CPSF7Q8N684 471 aaKnown RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 OR7G1Q8NGA0 311 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 C16orf52Q8NHV5 167 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 MZB1Q8WU39 189 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 PPWD1Q96BP3 646 aaKnown RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 KLHL29Q96CT2 875 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 DTNBP1Q96EV8 351 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 FAM173AQ9BQD7 235 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 EPB41L4BQ9H329 900 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 RUBCNLQ9H714 662 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
CCM2-208ENST00000476594 MID1IP1Q9NPA3 183 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 PFDN4Q9NQP4 134 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 PCDHA9Q9Y5H5 950 aa9.47□□□□□ -0.89
CCM2-208ENST00000476594 C2orf92A0A1B0GVN3 265 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 A0A1W2PPM1 405 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 TLDC2A0PJX2 215 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 CCL21O00585 134 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 PCDH7O60245 1069 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 PRKNO60260 465 aaPredicted RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 PLIN3O60664 434 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 ERAL1O75616 437 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 BCAS2O75934 225 aaPredicted RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 OR6B1O95007 311 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 PROCP04070 461 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 SHBGP04278 402 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 TUBBP07437 444 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 NUDT17P0C025 328 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 CPMP14384 443 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 DRD2P14416 443 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 CPA3P15088 417 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 CSNK2A2P19784 350 aaPredicted RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 CNR1P21554 472 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 ALDH9A1P49189 494 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 ST13P50502 369 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 DNAJB13P59910 316 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 PSPHP78330 225 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 PIGGQ5H8A4 983 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 SPDYAQ5MJ70 313 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 TBCELQ5QJ74 424 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 LIPMQ5VYY2 423 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 SLC48A1Q6P1K1 146 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 ARHGAP11AQ6P4F7 1023 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 RPS27LQ71UM5 84 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 SPPL2CQ8IUH8 684 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 AMER2Q8N7J2 671 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 AGAP11Q8TF27 550 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 TRMOQ9BU70 441 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 WWTR1Q9GZV5 400 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 ANKZF1Q9H8Y5 726 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 CXorf21Q9HAI6 301 aa9.46□□□□□ -0.9
CCM2-208ENST00000476594 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 FARSBQ9NSD9 589 aaKnown RBP9.46□□□□□ -0.9
CCM2-208ENST00000476594 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms