RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PAOXQ6QHF9 649 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPSF3-203ENST00000475482 LIX1Q8N485 282 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 POU5F2Q8N7G0 328 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 SRFBP1Q8NEF9 429 aaKnown RBP14.66□□□□□ -0.06
CPSF3-203ENST00000475482 NT5CQ8TCD5 201 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 CHTF18Q8WVB6 975 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 FCRL1Q96LA6 429 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 ANKHQ9HCJ1 492 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 ASF1BQ9NVP2 202 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 NDUFAF1Q9Y375 327 aa14.66□□□□□ -0.06
CPSF3-203ENST00000475482 SGK494L7N484 410 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 ANGPT2O15123 496 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 GALR3O60755 368 aaPredicted RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 C8orf89P0DMQ9 161 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 SMIM10L1P0DMW3 83 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 PRPS1L1P21108 318 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 IL10P22301 178 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 TSFMP43897 325 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 XCR1P46094 333 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 POLR2JP52435 117 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 STXBP1P61764 594 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 EEF1A2Q05639 463 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 TGM3Q08188 693 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 HYAL2Q12891 473 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 ART3Q13508 389 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 DPY19L1Q2PZI1 675 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 DEPDC1Q5TB30 811 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 KHDRBS2Q5VWX1 349 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 GALNT18Q6P9A2 607 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 BLOC1S3Q6QNY0 202 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 C16orf89Q6UX73 402 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 ASRGL1Q7L266 308 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 CISD2Q8N5K1 135 aaKnown RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 ANKRD53Q8N9V6 530 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 PLPP5Q8NEB5 264 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 MCUR1Q96AQ8 359 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 RGMAQ96B86 450 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 SLC7A6OSQ96CW6 309 aaPredicted RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 APIPQ96GX9 242 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 SMIM10Q96HG1 83 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 OR1F2PQ96R84 312 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 MS4A8Q9BY19 250 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 SLC6A16Q9GZN6 736 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 MMADHCQ9H3L0 296 aaPredicted RBP14.65□□□□□ -0.06
CPSF3-203ENST00000475482 LANCL2Q9NS86 450 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 HCN3Q9P1Z3 774 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 NTNG1Q9Y2I2 539 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 NAALAD2Q9Y3Q0 740 aa14.65□□□□□ -0.06
CPSF3-203ENST00000475482 DOPEY1Q5JWR5 2465 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 ARHGAP10A1A4S6 786 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 URADA6NGE7 173 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CCDC154A6NI56 674 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 NR5A2O00482 541 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CFLARO15519 480 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 NDUFS4O43181 175 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 RDH16O75452 317 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 IL6P05231 212 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 ICAM2P13598 275 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 DDX5P17844 614 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 ALOX12P18054 663 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 TIA1P31483 386 aaKnown RBP eCLIP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 RPL3P39023 403 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CPA2P48052 419 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 NME5P56597 212 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CLDN8P56748 225 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 RGS1Q08116 209 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 TBL3Q12788 808 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 RCAN2Q14206 197 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 SPRED3Q2MJR0 410 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 B3GNTL1Q67FW5 361 aaPredicted RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 FAAH2Q6GMR7 532 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 NIPAL1Q6NVV3 410 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 GK5Q6ZS86 529 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 METTL4Q8N3J2 472 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 C1orf52Q8N6N3 182 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 ZCCHC10Q8TBK6 192 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 DNAJB14Q8TBM8 379 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 BRIX1Q8TDN6 353 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CREB3L4Q8TEY5 395 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 SPDL1Q96EA4 605 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 PSMG3-AS1Q96PY0 264 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 PRPF18Q99633 342 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 EPS8L2Q9H6S3 715 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 CLK4Q9HAZ1 481 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 TAS2R1Q9NYW7 299 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 MCM8Q9UJA3 840 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 ADAM29Q9UKF5 820 aa14.64□□□□□ -0.07
CPSF3-203ENST00000475482 WBP11Q9Y2W2 641 aaKnown RBP14.64□□□□□ -0.07
CPSF3-203ENST00000475482 MAST4O15021 2626 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 A0A1W2PP18 115 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 GNG14A0A1W2PPG7 69 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 AIM2O14862 343 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 PCDH7O60245 1069 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 DNAJB6O75190 326 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 SERPIND1P05546 499 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 CELA2AP08217 269 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 ANXA4P09525 319 aaPredicted RBP14.63□□□□□ -0.07
CPSF3-203ENST00000475482 SDC1P18827 310 aa14.63□□□□□ -0.07
CPSF3-203ENST00000475482 NUDT2P50583 147 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms