RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 DPP4P27487 766 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 PTPN6P29350 595 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 NPY2RP49146 381 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 ATP12AP54707 1039 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 XGP55808 180 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 BTG3Q14201 252 aaPredicted RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 ZNF876PQ49A33 203 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 RFTN2Q52LD8 501 aaPredicted RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 LRRC8BQ6P9F7 803 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 CASC1Q6TDU7 716 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 Q6ZRG5 221 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 UNC5CLQ8IV45 518 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 ZNF397Q8NF99 534 aaPredicted RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 TRIM58Q8NG06 486 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 OR2T34Q8NGX1 318 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 RDH11Q8TC12 318 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 TMEM37Q8WXS4 190 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 ZNF524Q96C55 264 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 ZNF501Q96CX3 271 aaPredicted RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 FAM218AQ96MZ4 157 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 DEFB118Q96PH6 123 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 F2RL3Q96RI0 385 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 NDUFAF3Q9BU61 184 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 RBM4Q9BWF3 364 aaKnown RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 POLR1EQ9GZS1 481 aaKnown RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 CXXC4Q9H2H0 198 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 COG4Q9H9E3 785 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 C3orf14Q9HBI5 128 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 GDF3Q9NR23 364 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 FARSBQ9NSD9 589 aaKnown RBP3.58□□□□□ -1.84
SMC4-208ENST00000467468 GTSE1Q9NYZ3 720 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 MIOXQ9UGB7 285 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 PLCL2Q9UPR0 1127 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 WDR37Q9Y2I8 494 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 WIPI2Q9Y4P8 454 aa3.58□□□□□ -1.84
SMC4-208ENST00000467468 A0A1W2PR80 420 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 CUX2O14529 1486 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 GMFGO60234 142 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ZG16O60844 167 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 AMBPP02760 352 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OPN1MWP04001 364 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 FCER2P06734 321 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 LYNP07948 512 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 CFC1BP0CG36 223 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 CFC1P0CG37 223 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OPN1MW2P0DN77 364 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OPN1MW3P0DN78 364 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 EPB41P11171 864 aaKnown RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 EDNRAP25101 427 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 PSMA5P28066 241 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 HTR2AP28223 471 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OTX2P32243 289 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 KDRP35968 1356 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 GBX2P52951 348 aaPredicted RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 ACTR1AP61163 376 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ERVK11-1P61568 191 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 RIGQ13278 110 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 CLPPQ16740 277 aaPredicted RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 KIF7Q2M1P5 1343 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ANKRD55Q3KP44 614 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 TMEM30BQ3MIR4 351 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 LRIT3Q3SXY7 679 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 SLC36A3Q495N2 470 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 NADK2Q4G0N4 442 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ACSF3Q4G176 576 aaPredicted RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 ATAD3BQ5T9A4 648 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 CES3Q6UWW8 571 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 PAQR9Q6ZVX9 377 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ASRGL1Q7L266 308 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 GOLGA7Q7Z5G4 137 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 GCNT2Q8N0V5 402 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 DCLK2Q8N568 766 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 MLKLQ8NB16 471 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 TMEM178AQ8NBL3 297 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 STKLD1Q8NE28 680 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OR52M1Q8NGK5 317 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 OR5M9Q8NGP3 310 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 SMAP2Q8WU79 429 aaPredicted RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 MRPL24Q96A35 216 aaKnown RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 AZIN2Q96A70 460 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 COG3Q96JB2 828 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 MAGED4Q96JG8 741 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ACCSQ96QU6 501 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 FUCA2Q9BTY2 467 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 RAB11FIP5Q9BXF6 653 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 ZNF696Q9H7X3 374 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 RMND5AQ9H871 391 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 WDR76Q9H967 626 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 PALMDQ9NP74 551 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 C2orf42Q9NWW7 574 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 P2RX2Q9UBL9 471 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 RABL2BQ9UNT1 228 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 C2CD2Q9Y426 696 aa3.57□□□□□ -1.84
SMC4-208ENST00000467468 DDX49Q9Y6V7 483 aaKnown RBP3.57□□□□□ -1.84
SMC4-208ENST00000467468 GLTPD2A6NH11 291 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 SLCO1B7G3V0H7 640 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms