RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GK3PQ14409 553 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 MYBPC3Q14896 1274 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 HLA-BQ31612 363 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 NHSL2Q5HYW2 709 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 OR9A2Q8NGT5 310 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 CEP76Q8TAP6 659 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 TBC1D20Q96BZ9 403 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 BDH2Q9BUT1 245 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 ZNF696Q9H7X3 374 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 A4GALTQ9NPC4 353 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 ZCCHC3Q9NUD5 404 aaKnown RBP19.73■□□□□ 0.75
GPC1-202ENST00000420138 ZNF780BQ9Y6R6 833 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 DLGAP1O14490 977 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 FOXS1O43638 330 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 DEAF1O75398 565 aaPredicted RBP19.72■□□□□ 0.75
GPC1-202ENST00000420138 CD1CP29017 333 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TP53BP2Q13625 1128 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 LTB4RQ15722 352 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 IQCCQ4KMZ1 466 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TMEM107Q6UX40 140 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 CARM1Q86X55 608 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 ZC3H7AQ8IWR0 971 aaKnown RBP19.72■□□□□ 0.75
GPC1-202ENST00000420138 OR4N5Q8IXE1 308 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 OR9A4Q8NGU2 314 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 HSH2DQ96JZ2 352 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 NPLQ9BXD5 320 aaPredicted RBP19.72■□□□□ 0.75
GPC1-202ENST00000420138 IL1RAPQ9NPH3 570 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 SEMA3GQ9NS98 782 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TMEM9Q9P0T7 183 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 SEMA5BQ9P283 1151 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 KLHL3Q9UH77 587 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 PLCL2Q9UPR0 1127 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 LY6G6EA0A0G2JKS1 128 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 PRAMEF27A3QJZ7 478 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 PATE3B3GLJ2 98 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 RASAL1O95294 804 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TFPTP0C1Z6 253 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 HOXB6P17509 224 aaKnown RBP19.72■□□□□ 0.75
GPC1-202ENST00000420138 MLLT3P42568 568 aaPredicted RBP19.72■□□□□ 0.75
GPC1-202ENST00000420138 SHC2P98077 582 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.72■□□□□ 0.75
GPC1-202ENST00000420138 CYBRD1Q53TN4 286 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 CRB2Q5IJ48 1285 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TBPL2Q6SJ96 375 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 USP53Q70EK8 1073 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 OR4K14Q8NGD5 310 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 SFXN5Q8TD22 340 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 SLC38A5Q8WUX1 472 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 RAB8BQ92930 207 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 TAMM41Q96BW9 452 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 ELP4Q96EB1 424 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 EPB41L1Q9H4G0 881 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 PDE7BQ9NP56 450 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 GIMAP4Q9NUV9 329 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 DNAJB9Q9UBS3 223 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 U3KQA8 63 aa19.72■□□□□ 0.75
GPC1-202ENST00000420138 PCDH15Q96QU1 1955 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 FAM227AF5H4B4 570 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 H3BMH7 237 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 RDH16O75452 317 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 ZBTB11O95625 1053 aaPredicted RBP19.71■□□□□ 0.75
GPC1-202ENST00000420138 CST1P01037 141 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 SMIM18P0DKX4 95 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 TLX1P31314 330 aaPredicted RBP19.71■□□□□ 0.75
GPC1-202ENST00000420138 PPM1FP49593 454 aaPredicted RBP19.71■□□□□ 0.75
GPC1-202ENST00000420138 XKP51811 444 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 KCNJ10P78508 379 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 GPLD1P80108 840 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 AMZ1Q400G9 498 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 TRIM61Q5EBN2 209 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 FOXB2Q5VYV0 432 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 Q8N9G6 341 aaPredicted RBP19.71■□□□□ 0.75
GPC1-202ENST00000420138 TFAP2CQ92754 450 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 TMBIM1Q969X1 311 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 AHCYL2Q96HN2 611 aaKnown RBP19.71■□□□□ 0.75
GPC1-202ENST00000420138 VPS50Q96JG6 964 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 ANKRA2Q9H9E1 313 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 CAPN10Q9HC96 672 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 ANKHQ9HCJ1 492 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 C11orf16Q9NQ32 467 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 SOHLH2Q9NX45 425 aa19.71■□□□□ 0.75
GPC1-202ENST00000420138 SCN3AQ9NY46 2000 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 M0QX08 132 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 TNFRSF10AO00220 468 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 DUX1O43812 170 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 OPN1SWP03999 348 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 MC3RP41968 323 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 VLDLRP98155 873 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 LIN52Q52LA3 116 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 ZDHHC21Q8IVQ6 265 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 CARFQ8N187 725 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 LRRC25Q8N386 305 aaPredicted RBP19.7■□□□□ 0.74
GPC1-202ENST00000420138 OR4C6Q8NH72 309 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 MAGED4Q96JG8 741 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 SLC35G5Q96KT7 338 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 C7orf34Q96L11 122 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 ANKRD60Q9BZ19 345 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 OR51I1Q9H343 314 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 GAREM1Q9H706 876 aa19.7■□□□□ 0.74
GPC1-202ENST00000420138 SLC6A14Q9UN76 642 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms