RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 COMMD6Q7Z4G1 85 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SPNS2Q8IVW8 549 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CYP4Z2PQ8N1L4 340 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 GHDCQ8N2G8 530 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CDYL2Q8N8U2 506 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CCDC63Q8NA47 563 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 FAM47BQ8NA70 645 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 PRR7Q8TB68 274 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SLC2A12Q8TD20 617 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ZNF675Q8TD23 568 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 AGAP11Q8TF27 550 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ASB15Q8WXK1 588 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 NCLNQ969V3 563 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TM4SF18Q96CE8 201 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 MTFMTQ96DP5 389 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 MTERF3Q96E29 417 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 C11orf24Q96F05 449 aaPredicted RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 PGM2Q96G03 612 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 APOPT1Q96IL0 206 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 TMEM237Q96Q45 408 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 FAM173AQ9BQD7 235 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 PARD6BQ9BYG5 372 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 OR8D2Q9GZM6 311 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 GSTO2Q9H4Y5 243 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CXorf21Q9HAI6 301 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 MID1IP1Q9NPA3 183 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 PLA2G3Q9NZ20 509 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SUCOQ9UBS9 1254 aaKnown RBP5.94□□□□□ -1.46
USP54-202ENST00000413442 SEC14L3Q9UDX4 400 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CES1P1Q9UKY3 287 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ERVK-11Q9UQG0 969 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ZNF835Q9Y2P0 537 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 CNTRLQ7Z7A1 2325 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 ZNF462Q96JM2 2506 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 BOD1L1Q8NFC6 3051 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 SPTA1P02549 2419 aa5.94□□□□□ -1.46
USP54-202ENST00000413442 A0A0G2JN53 185 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 C2orf92A0A1B0GVN3 265 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GNG14A0A1W2PPG7 69 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 LRRC14BA6NHZ5 514 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 A8MUA0 341 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 FAM47E-STBD1D6RA91 191 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GOLGA8RI6L899 631 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ACOT7O00154 380 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 SAP18O00422 153 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 RTCAO00442 366 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 AZIN1O14977 448 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 RGS16O15492 202 aaPredicted RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 TMPRSS11DO60235 418 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 SUSD5O60279 629 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 PLOD3O60568 738 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 EEDO75530 441 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 SHBGP04278 402 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 P04436 131 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GP1BBP13224 206 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 CPMP14384 443 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GNLYP22749 145 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GRK2P25098 689 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 MAPK1P28482 360 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 PPICP45877 212 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ASMTP46597 345 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 HNRNPFP52597 415 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 HK2P52789 917 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 HNRNPH2P55795 449 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 SLC37A1P57057 533 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ZNF763Q0D2J5 394 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 MAD2L1Q13257 205 aaPredicted RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 NR6A1Q15406 480 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 IMPG1Q17R60 797 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ZNF791Q3KP31 576 aaPredicted RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 C18orf63Q68DL7 685 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 TMEM211Q6ICI0 200 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 SPINK14Q6IE38 97 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ADNP2Q6IQ32 1131 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 ARHGAP11AQ6P4F7 1023 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GFRALQ6UXV0 394 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 RPTNQ6XPR3 784 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 NUP54Q7Z3B4 507 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GALNTL5Q7Z4T8 443 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 R3HCC1LQ7Z5L2 792 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 SLC22A16Q86VW1 577 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GALNT12Q8IXK2 581 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 LRRC25Q8N386 305 aaPredicted RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 CCNYL1Q8N7R7 359 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 TMEM52Q8NDY8 209 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 PAQR8Q8TEZ7 354 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 CTHRC1Q96CG8 243 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 C19orf60Q96EN9 201 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 MS4A3Q96HJ5 214 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 GPR137Q96N19 417 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 NSUN5Q96P11 429 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 SIGLEC12Q96PQ1 595 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 PSMG3-AS1Q96PY0 264 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 CDK15Q96Q40 435 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 TAAR6Q96RI8 345 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 RASL10BQ96S79 203 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 CSF3RQ99062 836 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 NPAS2Q99743 824 aa5.93□□□□□ -1.46
USP54-202ENST00000413442 MRPL1Q9BYD6 325 aaKnown RBP5.93□□□□□ -1.46
USP54-202ENST00000413442 RBCK1Q9BYM8 510 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms