RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 N6AMT1Q9Y5N5 214 aa4.25□□□□□ -1.73
HMGB1P13-201ENST00000406019 hCG_38984A0A1B0GV85 526 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ANKRD30BLA7E2S9 258 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 E9PMD0 336 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 SGK494L7N484 410 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 LGALS8O00214 317 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 E2F3O00716 465 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 MAPK13O15264 365 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 RIPK2O43353 540 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 NDUFA7O95182 113 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 PRAMEF12O95522 483 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ANGPTL1O95841 491 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 CRYAAP02489 173 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 PRKAR1AP10644 381 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 HNRNPA2B1P22626 353 aaKnown RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 EDNRAP25101 427 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 DPP4P27487 766 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 PTPN6P29350 595 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 LEPRP48357 1165 aaKnown RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 NPY2RP49146 381 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 GBX2P52951 348 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ACTR1AP61163 376 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 NME3Q13232 169 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 RIGQ13278 110 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 TEAD2Q15562 447 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 LRIT3Q3SXY7 679 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 NADK2Q4G0N4 442 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 HSP90B2PQ58FF3 399 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 GDPD4Q6W3E5 623 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 LACC1Q8IV20 430 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 CENPLQ8N0S6 344 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 TMEM37Q8WXS4 190 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 SUSD6Q92537 303 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 DEFB118Q96PH6 123 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ACCSQ96QU6 501 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 LZTS2Q9BRK4 669 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 DCTN5Q9BTE1 182 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 TRIM6Q9C030 488 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 POLR1EQ9GZS1 481 aaKnown RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 RMND5AQ9H871 391 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 MED17Q9NVC6 651 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 P2RX2Q9UBL9 471 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 BCAP29Q9UHQ4 241 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ERRFI1Q9UJM3 462 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF490Q9ULM2 529 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 WDR37Q9Y2I8 494 aa4.24□□□□□ -1.73
HMGB1P13-201ENST00000406019 KIF7Q2M1P5 1343 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 RNF123Q5XPI4 1314 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 SIGLEC5O15389 551 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 CDC123O75794 336 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 HPRP00739 348 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OPN1MWP04001 364 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OPN1MW2P0DN77 364 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OPN1MW3P0DN78 364 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 RPS2P15880 293 aaKnown RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 C4BPBP20851 252 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 DRD5P21918 477 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 HTR2AP28223 471 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 MAT2AP31153 395 aaKnown RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OTX2P32243 289 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 XGP55808 180 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 NAAAQ02083 359 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 GUCY2DQ02846 1103 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 DMTNQ08495 405 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 CHIT1Q13231 466 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 SNTB2Q13425 540 aaKnown RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 CLPPQ16740 277 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 ACSF3Q4G176 576 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 SPATA46Q5T0L3 261 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 C1orf189Q5VU69 101 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OTUD6AQ7L8S5 288 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 GCNT2Q8N0V5 402 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 DCLK2Q8N568 766 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 STKLD1Q8NE28 680 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF397Q8NF99 534 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR4D10Q8NGI6 311 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 RAB11FIP5Q9BXF6 653 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 COG4Q9H9E3 785 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 GDF3Q9NR23 364 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 STARD5Q9NSY2 213 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 GTSE1Q9NYZ3 720 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 ZNF175Q9Y473 711 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 RNF115Q9Y4L5 304 aa4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.23□□□□□ -1.73
HMGB1P13-201ENST00000406019 A0A1W2PR80 420 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 NTN3O00634 580 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 B4GAT1O43505 415 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 BUB1O43683 1085 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 FGF17O60258 216 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 KIAA0513O60268 411 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 TBX19O60806 448 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 TRMUO75648 421 aaKnown RBP4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 OR4F21O95013 312 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 MFN2O95140 757 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 CAVIN2O95810 425 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 CCDC159P0C7I6 412 aa4.22□□□□□ -1.73
HMGB1P13-201ENST00000406019 EPB41P11171 864 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms