RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 PCDHB3Q9Y5E6 796 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PCDHGB2Q9Y5G2 931 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 KMT2EQ8IZD2 1858 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 FITM1A5D6W6 292 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 EFCAB7A8K855 629 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MYO1GB0I1T2 1018 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CXCR6O00574 342 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CLDN4O14493 209 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 OR10H2O60403 315 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TPST1O60507 370 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TBX19O60806 448 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 KCNK5O95279 499 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TIAF1O95411 115 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 KRT75O95678 551 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 LMNAP02545 664 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 CPMP14384 443 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PORP16435 677 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 GPX2P18283 190 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MAOAP21397 527 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NT5EP21589 574 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PPIBP23284 216 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 HTR1EP28566 365 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 BTG2P78543 158 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SQSTM1Q13501 440 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 LASP1Q14847 261 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 LRRC23Q53EV4 343 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ARHGAP40Q5TG30 622 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PWWP2BQ6NUJ5 590 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 DBX2Q6ZNG2 339 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SHISA6Q6ZSJ9 500 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 WDR53Q7Z5U6 358 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZC3H7AQ8IWR0 971 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 MICU2Q8IYU8 434 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TNIP2Q8NFZ5 429 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CANT1Q8WVQ1 401 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TANKQ92844 425 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 RAB8BQ92930 207 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 TBC1D20Q96BZ9 403 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CLIP3Q96DZ5 547 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 REXO5Q96IC2 774 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 ZNF681Q96N22 645 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 NPLQ9BXD5 320 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 TRIM4Q9C037 500 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 S100A14Q9HCY8 104 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 PARD6AQ9NPB6 346 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SEMA3GQ9NS98 782 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SIRT3Q9NTG7 399 aaPredicted RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 DDX18Q9NVP1 670 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 GPATCH2Q9NW75 528 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 SEMA5BQ9P283 1151 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MAGEL2Q9UJ55 1249 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 CORO2BQ9UQ03 480 aa3.49□□□□□ -1.85
RTN4-208ENST00000404909 MRPS33Q9Y291 106 aaKnown RBP3.49□□□□□ -1.85
RTN4-208ENST00000404909 A0A1B0GX78 115 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 H3BMH7 237 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NTN3O00634 580 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 SCRG1O75711 98 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 GPR75O95800 540 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 MT-ND1P03886 318 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 IFNA16P05015 189 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FHP07954 510 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ANKRD34CP0C6C1 535 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 CCL4P13236 92 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 GGT1P19440 569 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ACP1P24666 158 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FRKP42685 505 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 ARSFP54793 590 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FOXL2P58012 376 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ADRM1Q16186 407 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SPATS1Q496A3 300 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 TRMT12Q53H54 448 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 VWA2Q5GFL6 755 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NIPAL1Q6NVV3 410 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FAM111BQ6SJ93 734 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SERPINA11Q86U17 422 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PPP1R3BQ86XI6 285 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PROSER1Q86XN7 944 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PTRH1Q86Y79 214 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 SLITRK4Q8IW52 837 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SAMD14Q8IZD0 417 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 AGBL5Q8NDL9 886 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 SIMC1Q8NDZ2 872 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OR52N2Q8NGI0 321 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 OR5D16Q8NGK9 328 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 NETO1Q8TDF5 533 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 XAGE5Q8WWM1 108 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 RBM18Q96H35 190 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 ZNF764Q96H86 408 aaPredicted RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 TACO1Q9BSH4 297 aaKnown RBP3.48□□□□□ -1.85
RTN4-208ENST00000404909 RASSF4Q9H2L5 321 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ZNF304Q9HCX3 659 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 ADAP2Q9NPF8 381 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PRTFDC1Q9NRG1 225 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 PDP2Q9P2J9 529 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 AP3M1Q9Y2T2 418 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FREM2Q5SZK8 3169 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 DHRS12A0PJE2 317 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 FAM220BPB1ANY3 271 aa3.48□□□□□ -1.85
RTN4-208ENST00000404909 H0YIG0 161 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms