RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ANKRD34AQ69YU3 496 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 LRRC8EQ6NSJ5 796 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 UGT3A1Q6NUS8 523 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 NEPROQ6NW34 567 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 DGAT2L6Q6ZPD8 337 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 MILR1Q7Z6M3 343 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 GRAMD2AQ8IUY3 354 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 CNEP1R1Q8N9A8 125 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 PGM2Q96G03 612 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 SERINC2Q96SA4 455 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 WWTR1Q9GZV5 400 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 ADAM19Q9H013 955 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 SHARPINQ9H0F6 387 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 TEX10Q9NXF1 929 aaPredicted RBP13.27□□□□□ -0.29
VAMP4-202ENST00000367740 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 FREM1Q5H8C1 2179 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 MALRD1Q5VYJ5 2156 aa13.27□□□□□ -0.29
VAMP4-202ENST00000367740 A0A088AWK7 358 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 FRG2CA6NGY1 282 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 MFAP3LO75121 409 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 NDUFS7O75251 213 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 TBX6O95947 436 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-202ENST00000367740 CRHP06850 196 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 SOD3P08294 240 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 SRD5A1P18405 259 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF10P21506 573 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-202ENST00000367740 CASP9P55211 416 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 EBPQ15125 230 aaKnown RBP13.26□□□□□ -0.29
VAMP4-202ENST00000367740 SCIMPQ6UWF3 145 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 NXPE4Q6UWF7 544 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 TMEM64Q6YI46 380 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 MEX3DQ86XN8 651 aaKnown RBP13.26□□□□□ -0.29
VAMP4-202ENST00000367740 ARIH2OSQ8N7S6 290 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 GPATCH11Q8N954 259 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 SPPL2AQ8TCT8 520 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 AKAP1Q92667 903 aaKnown RBP eCLIP13.26□□□□□ -0.29
VAMP4-202ENST00000367740 TMEM41AQ96HV5 264 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 FBXL20Q96IG2 436 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
VAMP4-202ENST00000367740 TRRAPQ9Y4A5 3859 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 PLOD2O00469 737 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 TP53I11O14683 189 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 GNB5O14775 395 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HCRTR2O43614 444 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 PGRP06401 933 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HIST1H2AGP0C0S8 130 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 COX7A2P14406 83 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HIST1H2ADP20671 130 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 CASP3P42574 277 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 STT3AP46977 705 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 SLC6A12P48065 614 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 KCNJ5P48544 419 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 IGLV3-21P80748 117 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 VLDLRP98155 873 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 RCN2Q14257 317 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 ADPRMQ3LIE5 342 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 TIGD3Q6B0B8 471 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 SBSNQ6UWP8 590 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 PALM2Q8IXS6 379 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 OR2L5Q8NG80 312 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 FBXL8Q96CD0 374 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 PLPPR2Q96GM1 343 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HIST1H2AHQ96KK5 128 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HIST1H2AJQ99878 128 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 H2AFJQ9BTM1 129 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 ESRP2Q9H6T0 727 aaKnown RBP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 RYDENQ9NUL5 291 aaKnown RBP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 HEY2Q9UBP5 337 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
VAMP4-202ENST00000367740 DYRK1BQ9Y463 629 aa13.25□□□□□ -0.29
VAMP4-202ENST00000367740 LIASO43766 372 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 FGF17O60258 216 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 CGAP01215 116 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 DANCRP0C864 163 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 ZSCAN5DPP0CG00 497 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF16P17020 682 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 GCKP35557 465 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 SLC1A2P43004 574 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 KIR2DL2P43627 348 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 LHX2P50458 406 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 AP1S2P56377 157 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 TPM4P67936 248 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 FUT7Q11130 342 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 TRIM40Q6P9F5 258 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 ABHD17CQ6PCB6 329 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 ENPP6Q6UWR7 440 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 SLC29A4Q7RTT9 530 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 MYO1HQ8N1T3 1032 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 LILRB1Q8NHL6 650 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 CCT6BQ92526 530 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 GTPBP3Q969Y2 492 aaKnown RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 PPWD1Q96BP3 646 aaKnown RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 DGAT2Q96PD7 388 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms