RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SLC12A4Q9UP95 1085 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 ERVK-19Q9WJR5 959 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 MEMO1Q9Y316 297 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 NCOA6Q14686 2063 aaPredicted RBP14.87□□□□□ -0.03
USE1-201ENST00000263897 CELSR2Q9HCU4 2923 aa14.87□□□□□ -0.03
USE1-201ENST00000263897 A0A1B0GTH9 108 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 ARHGAP10A1A4S6 786 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PINLYPA6NC86 204 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PRRG2O14669 202 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PYGBP11216 843 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PRKAA2P54646 552 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 SLC37A1P57057 533 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PPIAP62937 165 aaKnown RBP14.86□□□□□ -0.03
USE1-201ENST00000263897 ADORA2A-AS1P86434 159 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 ZNF791Q3KP31 576 aaPredicted RBP14.86□□□□□ -0.03
USE1-201ENST00000263897 NDUFAF5Q5TEU4 345 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 XKRXQ6PP77 449 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 RNF111Q6ZNA4 994 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 COMMD6Q7Z4G1 85 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 SLC22A9Q8IVM8 553 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 OR4K14Q8NGD5 310 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 SLC22A8Q8TCC7 542 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PHF12Q96QT6 1004 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 FAM173AQ9BQD7 235 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 CXorf21Q9HAI6 301 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 PLSCR2Q9NRY7 297 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 SACM1LQ9NTJ5 587 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 ENTPD4Q9Y227 616 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 KLF2Q9Y5W3 355 aaPredicted RBP14.86□□□□□ -0.03
USE1-201ENST00000263897 CRYBG3Q68DQ2 2970 aa14.86□□□□□ -0.03
USE1-201ENST00000263897 NINQ8N4C6 2090 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 A0A1W2PPM1 405 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 A0A1W2PS29 197 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 OR6C76A6NM76 312 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 PRSS44E7EML9 344 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 G3V3Y1 287 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 MANBAO00462 879 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 CDC40O60508 579 aaKnown RBP eCLIP14.85□□□□□ -0.03
USE1-201ENST00000263897 GUCY1B2O75343 617 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 NADKO95544 446 aaPredicted RBP14.85□□□□□ -0.03
USE1-201ENST00000263897 P04436 131 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 PTGS2P35354 604 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 XKP51811 444 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 SMSP52788 366 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 MAPK12P53778 367 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 PLGLB1Q02325 96 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 GALNT1Q10472 559 aaPredicted RBP14.85□□□□□ -0.03
USE1-201ENST00000263897 TBL3Q12788 808 aaKnown RBP14.85□□□□□ -0.03
USE1-201ENST00000263897 RASA2Q15283 850 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 SLC22A10Q63ZE4 541 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 LYPD8Q6UX82 237 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 RGS9BPQ6ZS82 235 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 GK5Q6ZS86 529 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 SLC29A4Q7RTT9 530 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 GSPT2Q8IYD1 628 aaKnown RBP14.85□□□□□ -0.03
USE1-201ENST00000263897 CDYL2Q8N8U2 506 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 AGAP11Q8TF27 550 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 TM4SF18Q96CE8 201 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 TMEM237Q96Q45 408 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 ZNF382Q96SR6 550 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 DEFB127Q9H1M4 99 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 RYDENQ9NUL5 291 aaKnown RBP14.85□□□□□ -0.03
USE1-201ENST00000263897 VPS29Q9UBQ0 182 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 CES1P1Q9UKY3 287 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 PCDHA9Q9Y5H5 950 aa14.85□□□□□ -0.03
USE1-201ENST00000263897 PKDREJQ9NTG1 2253 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 A0A0G2JMM0 328 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 A0A1W2PPB8 328 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 A0A1W2PRS3 328 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 KIR3DP1A8MWS1 328 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 E9PLN8 166 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 ADAM10O14672 748 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 ULK1O75385 1050 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 PDE9AO76083 593 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 GLSO94925 669 aaPredicted RBP14.84□□□□□ -0.03
USE1-201ENST00000263897 KRT6AP02538 564 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 CLPSP04118 112 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 KRT6BP04259 564 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 CCL3P10147 92 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 HSD3B1P14060 373 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 PORP16435 677 aaPredicted RBP14.84□□□□□ -0.03
USE1-201ENST00000263897 AGAP20933 346 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 HSD3B2P26439 372 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 KRT6CP48668 564 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 FUT7Q11130 342 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 TCHHL1Q5QJ38 904 aaPredicted RBP14.84□□□□□ -0.03
USE1-201ENST00000263897 FAM219BQ5XKK7 198 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 PAOXQ6QHF9 649 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 FAM47EQ6ZV65 393 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 SH2D5Q6ZV89 423 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 GPRIN3Q6ZVF9 776 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 FAM57AQ8TBR7 257 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 METTL6Q8TCB7 284 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 CHTF18Q8WVB6 975 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 L3HYPDHQ96EM0 354 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 VKORC1Q9BQB6 163 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 TTTY12Q9BZ98 90 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 WWTR1Q9GZV5 400 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 ZDHHC11Q9H8X9 412 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms