RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TBC1D24Q9ULP9 559 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 DNAJC13O75165 2243 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 GLI3P10071 1580 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MEIOCA2RUB1 952 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 CDK1P06493 297 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 SLC35G6P0C7Q6 338 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 PTPN2P17706 415 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 TMEM107Q6UX40 140 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 LAX1Q8IWV1 398 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 DPEP2Q9H4A9 486 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 LTBP3Q9NS15 1303 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 LOC102723532A0A0G2JNH3 316 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 KCNK5O95279 499 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 PTTG1O95997 202 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 GCGRP47871 477 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ADAM15Q13444 863 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ATXN7L3Q14CW9 347 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 HSD11B1LQ7Z5J1 315 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 DENND6BQ8NEG7 585 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 PPIL3Q9H2H8 161 aaKnown RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF821O75541 412 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 PRLP01236 227 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 IL7P13232 177 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 AOAHP28039 575 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 GRPRP30550 384 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 KEAP1Q14145 624 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 BCL2L15Q5TBC7 163 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 CBLL1Q75N03 491 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ADGRD2Q7Z7M1 963 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ENTHD1Q8IYW4 607 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 OR52N2Q8NGI0 321 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 SMPDL3AQ92484 453 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 IRF7Q92985 503 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 OTUB2Q96DC9 234 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 DPCDQ9BVM2 203 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 MROQ9BYG7 248 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 QRSL1Q9H0R6 528 aaKnown RBP13.11□□□□□ -0.31
NFKB1-201ENST00000226574 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF225Q9UK10 706 aa13.11□□□□□ -0.31
NFKB1-201ENST00000226574 MTNR1AP48039 350 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 PNLIPRP1P54315 467 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 NOGQ13253 232 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 SFRP4Q6FHJ7 346 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 PGBD2Q6P3X8 592 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 RANBP3LQ86VV4 465 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 BBS10Q8TAM1 723 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CYP17A1P05093 508 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CSNK1DP48730 415 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 FNTBP49356 437 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 FADDQ13158 208 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 KHDRBS2Q5VWX1 349 aaKnown RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 SLC25A25Q6KCM7 469 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 OR5AR1Q8NGP9 310 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 TSEN15Q8WW01 171 aaKnown RBP13.1□□□□□ -0.31
NFKB1-201ENST00000226574 WBP2Q969T9 261 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 NTN4Q9HB63 628 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 HCFC1R1Q9NWW0 138 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CLEC2DQ9UHP7 191 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 UQCRC2P22695 453 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 TOR1AIP1Q5JTV8 583 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CEACAM19Q7Z692 300 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 OR2B2Q9GZK3 357 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 FKBP7Q9Y680 259 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 HSPE1-MOB4S4R3N1 261 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 CABIN1Q9Y6J0 2220 aa13.1□□□□□ -0.31
NFKB1-201ENST00000226574 IGFBP1P08833 259 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 CLEC2LP0C7M8 214 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 CMPK1P30085 196 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 TGM4P49221 684 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 IL20RBQ6UXL0 311 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SERPINA11Q86U17 422 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 LRRTM4Q86VH4 590 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SLC30A8Q8IWU4 369 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 TEX26Q8N6G2 289 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 CD180Q99467 661 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms