RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ABI3BPQ7Z7G0 1075 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TTC29Q8NA56 475 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 NMD3Q96D46 503 aaKnown RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 MUS81Q96NY9 551 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 LMF1Q96S06 567 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 DPYSL5Q9BPU6 564 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TRIM15Q9C019 465 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 OR8D2Q9GZM6 311 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 PRDM7Q9NQW5 492 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 CCM2LQ9NUG4 571 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ATAD3AQ9NVI7 634 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 OR6C2Q9NZP2 312 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SNX7Q9UNH6 387 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TMEM184BQ9Y519 407 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ZNF780BQ9Y6R6 833 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 RNF215Q9Y6U7 377 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 A0A096LPI6 279 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ENO4A6NNW6 628 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 HRO43593 1189 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 F10P00742 488 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 LYNP07948 512 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 PIGAP37287 484 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ASMTP46597 345 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 NDUFAF6Q330K2 333 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 BCDIN3DQ7Z5W3 292 aaKnown RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 TRIM69Q86WT6 500 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 LAS2Q8IYD9 372 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 GPR151Q8TDV0 419 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TMIGD2Q96BF3 282 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 VCX3BQ9H321 246 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 RXFP3Q9NSD7 469 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SELENONQ9NZV5 590 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SEC14L3Q9UDX4 400 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SCML1Q9UN30 329 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 CENPVL1A0A0U1RR11 272 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ALOX12P18054 663 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 BLKP51451 505 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 IL5RAQ01344 420 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ALDH6A1Q02252 535 aaKnown RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ELOCQ15369 112 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 MEP1AQ16819 746 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 GGTA1PQ4G0N0 100 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ARMC3Q5W041 872 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 MCATQ8IVS2 390 aaKnown RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TRIML2Q8N7C3 387 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SLC38A5Q8WUX1 472 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ABCD2Q9UBJ2 740 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TCRBV3S1A0A5B6 114 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 CH25HO95992 272 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 UQCRBP14927 111 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 DDCP20711 480 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 AGXTP21549 392 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 MATN1P21941 496 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 NTSP30990 170 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 FMO3P31513 532 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 RACK1P63244 317 aaKnown RBP9.93□□□□□ -0.82
VPS11-208ENST00000621676 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 DGCR6Q14129 220 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 PRMT9Q6P2P2 845 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 TTC33Q6PID6 262 aaPredicted RBP9.93□□□□□ -0.82
VPS11-208ENST00000621676 B3GLCTQ6Y288 498 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ERMP1Q7Z2K6 904 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 VRK2Q86Y07 508 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 C11orf65Q8NCR3 313 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ABHD11Q8NFV4 315 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 OR2L5Q8NG80 312 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 CNIH3Q8TBE1 160 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 OR2A5Q96R48 311 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 APMAPQ9HDC9 416 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 SCOCQ9UIL1 159 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 LRRC42Q9Y546 428 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ROS1P08922 2347 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ALOX12BO75342 701 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 PRSS23O95084 383 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ALBP02768 609 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 OPN1LWP04000 364 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 HSD17B1P14061 328 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ZNF26P17031 533 aaPredicted RBP9.93□□□□□ -0.82
VPS11-208ENST00000621676 EEFSECP57772 596 aaKnown RBP9.93□□□□□ -0.82
VPS11-208ENST00000621676 REEP5Q00765 189 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 CLEC12AQ5QGZ9 265 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 AAGABQ6PD74 315 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 LPCAT2Q7L5N7 544 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 C16orf62Q7Z3J2 963 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 LACC1Q8IV20 430 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ZZZ3Q8IYH5 903 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 TBC1D19Q8N5T2 526 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 FAM174AQ8TBP5 190 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 ORAI3Q9BRQ5 295 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 DGCR6LQ9BY27 220 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 FAM86C1Q9NVL1 165 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 LRCH1Q9Y2L9 728 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms