RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ACTRT2Q8TDY3 377 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 EXOSC8Q96B26 276 aaKnown RBP17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 FER1L6-AS2Q96M78 137 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 LPAR4Q99677 370 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 TUBB6Q9BUF5 446 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 ADAP2Q9NPF8 381 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 EHD3Q9NZN3 535 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 CACNA1GO43497 2377 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 DOCK10Q96BY6 2186 aa17.75■□□□□ 0.43
CLPTM1-209ENST00000588855 SAGE2PA6NJ88 616 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 CELA2AP08217 269 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 STT3AP46977 705 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 PLIN5Q00G26 463 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 DUSP2Q05923 314 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 LSM12Q3MHD2 195 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 TMEM198Q66K66 360 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 ANKRD26P1Q6NSI1 321 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 CGB2Q6NT52 195 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 DGAT2L6Q6ZPD8 337 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 TMEM102Q8N9M5 508 aaPredicted RBP17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 PPWD1Q96BP3 646 aaKnown RBP17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 CNRIP1Q96F85 164 aaPredicted RBP17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 IMMP1LQ96LU5 166 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 DGAT2Q96PD7 388 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 ZNF317Q96PQ6 595 aaPredicted RBP17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 TRIM55Q9BYV6 548 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 ING2Q9H160 280 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 REEP4Q9H6H4 257 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 DCTN4Q9UJW0 460 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 PSME2Q9UL46 239 aa17.74■□□□□ 0.43
CLPTM1-209ENST00000588855 SYNDIG1LA6NDD5 238 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 POLR3GO15318 223 aaPredicted RBP17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 DNAJB5O75953 348 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 FEN1P39748 380 aaKnown RBP17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 XKP51811 444 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 RRADP55042 308 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 Q0VFX4 171 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 ELAVL1Q15717 326 aaKnown RBP17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 TBR1Q16650 682 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 BORAQ6PGQ7 559 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 ACAD11Q709F0 780 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 SPATA19Q7Z5L4 167 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 ST13P4Q8IZP2 240 aaPredicted RBP17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 CEP70Q8NHQ1 597 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 MARK4Q96L34 752 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 TCF7L2Q9NQB0 619 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 AIG1Q9NVV5 245 aa17.73■□□□□ 0.43
CLPTM1-209ENST00000588855 SCAMP2O15127 329 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 OR10H2O60403 315 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 SLC35E2P0CK97 266 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 CPMP14384 443 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PTGER1P34995 402 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 SLC26A5P58743 744 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PDE7AQ13946 482 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 ZNF385BQ569K4 471 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 APLFQ8IW19 511 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PARP9Q8IXQ6 854 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 KRTCAP2Q8N6L1 136 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 CLEC1AQ8NC01 280 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 NFAM1Q8NET5 270 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 DOK4Q8TEW6 326 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PTPMT1Q8WUK0 201 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 NUDT8Q8WV74 236 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 EXTL1Q92935 676 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 ZNF681Q96N22 645 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 SLC35C2Q9NQQ7 365 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 ZNF780BQ9Y6R6 833 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 KMT2BQ9UMN6 2715 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 C17orf105B2RV13 164 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 COX7A2P14406 83 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PORP16435 677 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 TNNI3P19429 210 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 HPCAL1P37235 193 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 SF3A3Q12874 501 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 AIMP2Q13155 320 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 BIKQ13323 160 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 TERF2Q15554 542 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 BTBD16Q32M84 506 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PLAG1Q6DJT9 500 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 C7orf57Q8NEG2 295 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 OR14A16Q8NHC5 309 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 APOBEC4Q8WW27 367 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 RBM18Q96H35 190 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 PELOQ9BRX2 385 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 CCDC28BQ9BUN5 200 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 ATP13A2Q9NQ11 1180 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 TAS2R7Q9NYW3 318 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 G3BP2Q9UN86 482 aaKnown RBP17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 ENTPD4Q9Y227 616 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 CLCA3PQ9Y6N3 262 aa17.72■□□□□ 0.43
CLPTM1-209ENST00000588855 A0A0G2JND7 137 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 GABRR3A8MPY1 467 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 E9PBE3 544 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 KLHL41O60662 606 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 TBX19O60806 448 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 ITGB2P05107 769 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 TROVE2P10155 538 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 CSNK2A2P19784 350 aaPredicted RBP17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 PGDP52209 483 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms