RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	LRRC69	Q6ZNQ3	347 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	LAPTM4B	Q86VI4	370 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	PROSER1	Q86XN7	944 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ZSCAN1	Q8NBB4	408 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ZFP28	Q8NHY6	868 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	TSLP	Q969D9	159 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	GFM2	Q969S9	779 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	EXOSC8	Q96B26	276 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	NAF1	Q96HR8	494 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	MARK4	Q96L34	752 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ZNF385D	Q9H6B1	395 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	CLMP	Q9H6B4	373 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ADAP2	Q9NPF8	381 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	WDR70	Q9NW82	654 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	SH3BP4	Q9P0V3	963 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	IL17B	Q9UHF5	180 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	EXO1	Q9UQ84	846 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	SSUH2	Q9Y2M2	353 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ARL2BP	Q9Y2Y0	163 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	CLDN16	Q9Y5I7	305 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	COPG1	Q9Y678	874 aa	Known RBP	11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	FAM208B	Q5VWN6	2430 aa		11.26	□□□□□ -0.61
FANCA-231	ENST00000568626	ACACA	Q13085	2346 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	DYTN	A2CJ06	578 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	PEX12	O00623	359 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	NDUFAB1	O14561	156 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	PDPK1	O15530	556 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	OR10H2	O60403	315 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ERAL1	O75616	437 aa	Known RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	CPM	P14384	443 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	POR	P16435	677 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	NCF2	P19878	526 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	OTX2	P32243	289 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	XK	P51811	444 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	LRRC74A	Q0VAA2	488 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	IL10RA	Q13651	578 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	MSANTD1	Q6ZTZ1	278 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	PPP1R32	Q7Z5V6	425 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ANKRD37	Q7Z713	158 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	MRGPRE	Q86SM8	312 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	SPACA3	Q8IXA5	215 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	SHISA5	Q8N114	240 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	MMP21	Q8N119	569 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	LRRC25	Q8N386	305 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	CPSF7	Q8N684	471 aa	Known RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	KRTCAP2	Q8N6L1	136 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	OR8J2	Q8NGG1	315 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	OR14A16	Q8NHC5	309 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ADAMTS17	Q8TE56	1095 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	THAP4	Q8WY91	577 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	COQ8B	Q96D53	544 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	CNRIP1	Q96F85	164 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	RBM18	Q96H35	190 aa	Known RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	DGAT2	Q96PD7	388 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	BBS4	Q96RK4	519 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	LPAR4	Q99677	370 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ALOXE3	Q9BYJ1	711 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	NECTIN3	Q9NQS3	549 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	C5AR2	Q9P296	337 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	G3BP2	Q9UN86	482 aa	Known RBP	11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	HS3ST3B1	Q9Y662	390 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	FREM2	Q5SZK8	3169 aa		11.25	□□□□□ -0.61
FANCA-231	ENST00000568626	FAM234B	A2RU67	622 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	GABRR3	A8MPY1	467 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	MYO1G	B0I1T2	1018 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	TGFBR3L	H3BV60	316 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	DCTN3	O75935	186 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	IFNA16	P05015	189 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ATP1B1	P05026	303 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	IL6	P05231	212 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	IFI6	P09912	130 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	GPX3	P22352	226 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	S100A3	P33764	101 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	MPI	P34949	423 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	FRK	P42685	505 aa	Predicted RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	EFNA3	P52797	238 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	NME5	P56597	212 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	KCNK10	P57789	538 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	FOXL2	P58012	376 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	OR4D2	P58180	307 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	UFM1	P61960	85 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	AP2B1	P63010	937 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	1e-6	■■■■■ 28.1
FANCA-231	ENST00000568626	RCAN2	Q14206	197 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	MLC1	Q15049	377 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	MAPRE2	Q15555	327 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	SPRED3	Q2MJR0	410 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	FAM174B	Q3ZCQ3	159 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ANXA8L1	Q5VT79	327 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	RIPOR1	Q6ZS17	1223 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	LANCL3	Q6ZV70	420 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	OR4N5	Q8IXE1	308 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ANKS4B	Q8N8V4	417 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms