RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 WWP1Q9H0M0 922 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 ELL3Q9HB65 397 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 PLEK2Q9NYT0 353 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 SENP1Q9P0U3 644 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 EIF3KQ9UBQ5 218 aaKnown RBP2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 RPS6KB2Q9UBS0 482 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 GPR132Q9UNW8 380 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 TTLL3Q9Y4R7 772 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 OR1A2Q9Y585 309 aa2.16□□□□□ -2.06
HMGB1P33-201ENST00000563485 IGHV3OR16-12A0A075B7B8 117 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 ATP6AP2A0A1C7CYW4 349 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 EFCAB7A8K855 629 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 PANO1I0J062 215 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 ST8SIA3O43173 380 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 GPAA1O43292 621 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 STAM2O75886 525 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 PRAMEF12O95522 483 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 RLN1P04808 185 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 SBK2P0C263 348 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 CALML3P27482 149 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 MTIF2P46199 727 aaKnown RBP2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 IER3P46695 156 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLC10A1Q14973 349 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 PAN3Q58A45 887 aaKnown RBP2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 TRAT1Q6PIZ9 186 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 OTOAQ7RTW8 1153 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 C4orf19Q8IY42 314 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 ICA1LQ8NDH6 482 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 GANCQ8TET4 914 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 CKAP2Q8WWK9 683 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 SNRNP40Q96DI7 357 aaKnown RBP2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 PIWIL1Q96J94 861 aaKnown RBP2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 CASD1Q96PB1 797 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 RAB3IPQ96QF0 476 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 RASL10BQ96S79 203 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 C17orf62Q9BQA9 187 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 CXXC4Q9H2H0 198 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 MYOZ2Q9NPC6 264 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 IMPAD1Q9NX62 359 aa2.15□□□□□ -2.07
HMGB1P33-201ENST00000563485 YDJCA8MPS7 323 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 SYT7O43581 403 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 DUSP14O95147 198 aaKnown RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 APBB3O95704 486 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 LDHCP07864 332 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 LAMP1P11279 417 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF17P17021 662 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CCND3P30281 292 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CCR4P51679 360 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ARHGDIAP52565 204 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 MFAP2P55001 183 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 AKAP17AQ02040 695 aaKnown RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ACER2Q5QJU3 275 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CASC4Q6P4E1 433 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 TMED8Q6PL24 325 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CYP4V2Q6ZWL3 525 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLFN11Q7Z7L1 901 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 LAX1Q8IWV1 398 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF444Q8N0Y2 327 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CEND1Q8N111 149 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 GPR137CQ8N3F9 429 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 UXS1Q8NBZ7 420 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 SPATA18Q8TC71 538 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CRYGNQ8WXF5 182 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 DNASE1L2Q92874 299 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ST6GALNAC5Q9BVH7 336 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 IDI2Q9BXS1 227 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 HES7Q9BYE0 225 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 CUEDC2Q9H467 287 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 ISG20L2Q9H9L3 353 aaKnown RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 TIGARQ9NQ88 270 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 KLRF1Q9NZS2 232 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 TMEM9Q9P0T7 183 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 NFKBIL1Q9UBC1 381 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 SEC14L4Q9UDX3 406 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 PRODH2Q9UF12 536 aa2.14□□□□□ -2.07
HMGB1P33-201ENST00000563485 PLOD3O60568 738 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 SIX3O95343 332 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 GJB5O95377 273 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 TSPY3P0CV98 308 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 TSPY8P0CW00 308 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 CPN1P15169 458 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 WNT4P56705 351 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 KCTD2Q14681 263 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 MEF2DQ14814 521 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 SPHARQ15513 63 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 MICAQ29983 383 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 TWISTNBQ3B726 338 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 CELF3Q5SZQ8 465 aaKnown RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 SNRNP48Q6IEG0 339 aaKnown RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 PODNL1Q6PEZ8 512 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 Q6ZRG5 221 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 C17orf64Q86WR6 236 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF677Q86XU0 584 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 SETD6Q8TBK2 473 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 OR5M11Q96RB7 305 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF559Q9BR84 538 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 LRRC2Q9BYS8 371 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 RNF41Q9H4P4 317 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 TERF2IPQ9NYB0 399 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLCO1C1Q9NYB5 712 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms